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WormBase Tree Display for Gene: WBGene00001769

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Name Class

WBGene00001769EvidencePerson_evidenceWBPerson1846
SMapS_parentSequenceZK697
IdentityVersion1
NameCGC_namegst-21
Sequence_nameZK697.6
Molecular_nameZK697.6a
ZK697.6a.1
CE15405
ZK697.6b
CE45347
ZK697.6b.1
Other_nameCELE_ZK697.6Accession_evidenceNDBBX284605
Public_namegst-21
DB_infoDatabaseAceViewgene5C204
WormQTLgeneWBGene00001769
WormFluxgeneWBGene00001769
NDBlocus_tagCELE_ZK697.6
PanthergeneCAEEL|WormBase=WBGene00001769|UniProtKB=H2L0Q5
familyPTHR11571
NCBIgene191412
RefSeqproteinNM_001269074.3
NM_001269073.2
TREEFAMTREEFAM_IDTF353041
TrEMBLUniProtAccO44576
H2L0Q5
UniProt_GCRPUniProtAccH2L0Q5
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgst
Allele (36)
RNASeq_FPKM (74)
GO_annotation00023265
Ortholog (33)
Paralog (45)
Structured_descriptionAutomated_descriptionEnriched in hypodermis; neuronal sheath cell; and sensory neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and daf-12 based on RNA-seq and microarray studies. Is affected by twenty-five chemicals including tryptophan; 1-methylnicotinamide; and methylmercuric chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Glutathione S-transferase, N-terminal; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain superfamily; Glutathione S-transferase, C-terminal; and Thioredoxin-like superfamily.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZK697.6a
ZK697.6b
Corresponding_transcriptZK697.6a.1
ZK697.6b.1
Other_sequenceGRC01915_1
Associated_featureWBsf652477
Experimental_infoRNAi_resultWBRNAi00115471Inferred_automaticallyRNAi_primary
WBRNAi00115536Inferred_automaticallyRNAi_primary
WBRNAi00069806Inferred_automaticallyRNAi_primary
WBRNAi00059687Inferred_automaticallyRNAi_primary
WBRNAi00022146Inferred_automaticallyRNAi_primary
WBRNAi00038427Inferred_automaticallyRNAi_primary
Expr_patternExpr1016799
Expr1163103
Expr2012305
Expr2030541
Microarray_results (14)
Expression_clusterWBPaper00031040:TGF-beta_adult_upregulated
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00042194:Tryptophan_upregulated
WBPaper00044037:eat-2_regulated_nhr-62_dependent
WBPaper00044037:eat-2_upregulated
WBPaper00044260:1-methylnicotinamide_upregulated
WBPaper00044316:CH3HgCl_0.75uM_upregulated
WBPaper00044316:CH3HgCl_2.0uM_upregulated
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045861:set-2(ok952)_upregulated
WBPaper00048988:neuron_expressed
WBPaper00049377:MWCNT_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050496:unc-39(hp701)_regulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:hypodermis_enriched
WBPaper00050990:hypodermis_expressed
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00054493:hpl-2(tm1489)_upregulated
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00055648:male-tail_expressed
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056275:P.aeruginosa_upregulated
WBPaper00056275:P.aeruginosa_upregulated_atf-7(qd22qd130)_dependent
WBPaper00056275:P.aeruginosa_upregulated_pmk-1(km25)_dependent
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056619:CEPsh_enriched
WBPaper00058599:benzimidazoles_upregulated
WBPaper00058711:skn-1(lax188)_downregulated
WBPaper00058711:wdr-5(ok1417)_upregulated
WBPaper00059253:resveratrol_upregulated
WBPaper00059604:fluvastatin_downregulated_dlk-1(km12)
WBPaper00059604:fluvastatin_downregulated_N2
WBPaper00059754:P.aeruginosa_PA14_upregulated
WBPaper00060399:pqm-1(ok485)_downregulated_CoCl2_6hr
WBPaper00060434:pH4.33_vs_pH6.33_uprgulated
WBPaper00060445:ikb-1(nr2027)_upregulated_L1
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061340:ADEsh
WBPaper00061340:CEPsh
WBPaper00061340:ILsh_OLLsh_OLQsh
WBPaper00061341:28C_48h_downregulated
WBPaper00061527:mtd-1-mec-18
WBPaper00061590:CGP37157_upregulated
WBPaper00061651:CEPsh_enriched
WBPaper00061651:PHso_enriched
WBPaper00061653:alh-4(hj221)_upregulated
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062146:MOG-7-degron_1h_regulated
WBPaper00062146:MOG-7-degron_2h_regulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:daf-16(RNAi)_downregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062345:bortezomib_4h_downregulated_N2
WBPaper00062345:bortezomib_4h_downregulated_zip-1(jy13)
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064509:static-magnetic-field_upregulated
WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
WBPaper00065841:5_0
WBPaper00065841:5_1
WBPaper00065841:34_0
WBPaper00065841:37_0
WBPaper00065841:64_0
WBPaper00065841:141_0
WBPaper00065993:glp-1(e2141)_upregulated
cgc4489_group_8
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00035560:ahr-1_upregulated
WBPaper00035588:alg-1(-)_upregulated
WBPaper00036123:Atrazine_regulated
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_I
WBPaper00037704:ABZ_up_regulated
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00041211:RPW-24_Up
WBPaper00044091:Bpseudomallei_induced_12h
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045374:Benzene_upregulated
WBPaper00046548:dafachronic-acid_upregulated
WBPaper00047021:MWCNT_upregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00047070:N2_UV_downregulated
WBPaper00047070:xpa-1_UV_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00055899:2,4-Dinitroanisole_regulated
Interaction (20)
Map_infoMapVPosition-17.7488Error0.001703
PositivePositive_cloneZK697Inferred_automatically (2)
Pseudo_map_position
ReferenceWBPaper00028883
WBPaper00038491
WBPaper00039527
WBPaper00055090
WBPaper00062515
WBPaper00062625
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene