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WormBase Tree Display for Gene: WBGene00001745

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Name Class

WBGene00001745SMapS_parentSequenceR06A10
IdentityVersion1
NameCGC_namegsa-1Person_evidenceWBPerson459
Sequence_nameR06A10.2
Molecular_nameR06A10.2a
R06A10.2a.1
CE47896
R06A10.2b
CE49189
R06A10.2b.1
Other_nameCELE_R06A10.2Accession_evidenceNDBBX284601
Public_namegsa-1
DB_infoDatabaseAceViewgene1B547
WormQTLgeneWBGene00001745
WormFluxgeneWBGene00001745
NDBlocus_tagCELE_R06A10.2
PanthergeneCAEEL|WormBase=WBGene00001745|UniProtKB=Q7KPV0
familyPTHR10218
NCBIgene171687
RefSeqproteinNM_001380932.1
NM_001380927.2
TrEMBLUniProtAccQ7KPV0
V6CL61
UniProt_GCRPUniProtAccQ7KPV0
OMIMgene139312
139320
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (12)
Disease_infoPotential_model (13)
Molecular_infoCorresponding_CDSR06A10.2a
R06A10.2b
Corresponding_CDS_historyR06A10.2:wp234
Corresponding_transcriptR06A10.2a.1
R06A10.2b.1
Other_sequence (79)
Associated_feature (24)
Experimental_infoRNAi_result (44)
Expr_patternExpr686
Expr1489
Expr3593
Expr1013408
Expr1031038
Expr1155044
Expr2012282
Expr2030518
Drives_constructWBCnstr00006670
WBCnstr00010301
WBCnstr00012490
WBCnstr00019885
Construct_product (8)
Microarray_results (18)
Expression_clusterWBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00033070:Rhine_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037055:DAF-16_binding_DNA
WBPaper00037946:EGL-5_interacting
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00040221:DAF-12_target_ALF4
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045521:Spermatogenic
WBPaper00046012:tdp-1(ok803)_downregulated
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00048988:neuron_enriched
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049626:UNC-75_target
WBPaper00050182:lmn-1(L535P)_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00051039:intestine_enriched
WBPaper00051245:body-wall-muscle_cytoplasm_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053289:DREAM-target
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:embryo-to-L1_downregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
WBPaper00053321:embryo-to-L1_downregulated_WT_SMARTseq
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053606:N2_vs_elt-7(tm840)_upregulated
WBPaper00054493:hpl-2(tm1489)_upregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055482:Tunicamycin_downregulated
WBPaper00055565:AVK_enriched
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056034:pals-25(jy9)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056826:hmc_biased
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_downregulated
WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_downregulated_endo-siRNA_targets
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00058958:100mGy-irradiation-72h_upregulated
WBPaper00058969:RIS_enriched
WBPaper00059027:neuron-synapses_depleted
WBPaper00059194:KLF-1_interacting
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059421:daf-3(mgDf90)_downregulated
WBPaper00059471:EGL-43_interacting
WBPaper00059609:malt-1_ilc-17.1_nfki-1_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059763:neuron_expressed
WBPaper00059987:Wounding_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060764:swsn-1(os22ts)_upregulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061007:HB101_upregulated
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:DD
WBPaper00061340:Intestinal_and_rectal_muscle
WBPaper00061340:SIA
WBPaper00061340:SIB
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061479:prg-1(tm872)_upregulated
WBPaper00061527:kin-29_2839-unc-9_3883
WBPaper00061527:tub-2_4713-daf-2_5288
WBPaper00061651:DA_enriched
WBPaper00061651:DB_enriched
WBPaper00061651:PDA_enriched
WBPaper00061800:miR-85(n4117)_downregulated_20C
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00062056:lin-15B(we23)_downregulated
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064107:lin-35(n745)_downregulated
WBPaper00064201:SNA-3_interacting
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064559:meg-1(vr10)meg-2(RNAi)_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00036286:Pattern_G
WBPaper00037113:Chlorpyrifos_Diazinon_16C_regulated
WBPaper00037113:CPF_DZN_16C_up-regulated
WBPaper00037113:Diazinon_16C_regulated
WBPaper00040210:Chlorpyrifos_16C_regulated
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00045294:50uM_DBAA_downregulated
Interaction (84)
WBProcessWBbiopr:00000120
Map_infoMapIPosition-16.9676Error0.036154
Well_ordered
PositivePositive_cloneR06A10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point3901
5345
Reference (72)
PictureWBPicture0000013094
RemarkA deletion derivative has been selected: pk75. It is a larval lethal. The insertion site of pk27 is: TAgatgtacaaaaaatgcgga (sequence Ohshima lab).
Tc1 insertion polymorphism available. krb 04/03/02
MethodGene