WormBase Tree Display for Gene: WBGene00000089

WBGene00000089 SMap: S_parent: Sequence: Y87G2A
  Identity: Version: 2
    Name: CGC_name: aex-6 Person_evidence: WBPerson655
      Sequence_name: Y87G2A.4
      Molecular_name: Y87G2A.4
        Y87G2A.4.1
        CE23130
      Other_name: rab-27 Paper_evidence: WBPaper00027193
        rab27 Accession_evidence: EMBL AB112930
        CELE_Y87G2A.4 Accession_evidence: NDB BX284601
      Public_name: aex-6
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:20 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 30 Aug 2006 16:49:06 WBPerson2970 Event: Acquires_merge: WBGene00004280
              Name_change: Sequence_name: Y87G2A.4
                Other_name: rab-27
      Acquires_merge: WBGene00004280
    Status: Live
  Gene_info (11)
  Disease_info: Potential_model: DOID:4330 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9766)
      DOID:0060833 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9766)
  Molecular_info (4)
  Experimental_info: RNAi_result: WBRNAi00037905 Inferred_automatically: RNAi_primary
      WBRNAi00083361 Inferred_automatically: RNAi_primary
      WBRNAi00089871 Inferred_automatically: RNAi_primary
      WBRNAi00004843 Inferred_automatically: RNAi_primary
      WBRNAi00091961 Inferred_automatically: RNAi_primary
      WBRNAi00090299 Inferred_automatically: RNAi_primary
      WBRNAi00090140 Inferred_automatically: RNAi_primary
      WBRNAi00107622 Inferred_automatically: RNAi_primary
      WBRNAi00058607 Inferred_automatically: RNAi_primary
      WBRNAi00089981 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr7833
      Expr7834
      Expr12461
      Expr1010179
      Expr1030041
      Expr1162029
      Expr2009251
      Expr2027488
    Drives_construct: WBCnstr00006400
      WBCnstr00012948
    Construct_product: WBCnstr00006400
    Antibody: WBAntibody00001066
      WBAntibody00001702
    Microarray_results (19)
    Expression_cluster: WBPaper00024970:GABAergic_neuron_specific
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:A-class-motor-neurons_larva_enriched
      WBPaper00037950:all-neurons_CoreEnriched
      WBPaper00037950:all-neurons_embryo_enriched
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_larva_enriched
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:BAG-neuron_embryo_enriched
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:dopaminergic-neurons_larva_enriched
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_larva_enriched
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_larva_enriched
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00044736:flat_dev_expression
      WBPaper00045420:fertilization_upregulated_transcript
      WBPaper00045521:Gender_Neutral
      WBPaper00045861:wdr-5(ok1417)_upregulated
      WBPaper00046805:P-granule-RNAi_upregulated_Set1
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00049495:starvation-refeeding_regulated
      WBPaper00049626:UNC-75_target
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00051558:aging_regulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00055103:thoc-5(wy822)_upregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055565:AVK_enriched
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00056073:NHR-86_interacting_promoter
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056284:ints-11(RNAi)_downregulated
      WBPaper00056826:hmc_biased
      WBPaper00057162:meg-3_meg-4_upregulated_sRNA
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00058969:RIS_enriched
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059471:EGL-43_interacting
      WBPaper00059566:wdr-23(mac32)_upregulated
      WBPaper00059763:neuron_expressed
      WBPaper00060459:bcat-1(RNAi)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:AIB
      WBPaper00061340:AIY
      WBPaper00061340:ASG
      WBPaper00061340:AVG
      WBPaper00061340:DVA
      WBPaper00061340:DVC
      WBPaper00061340:RIC
      WBPaper00061340:RID
      WBPaper00061340:RIS
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061479:ubc-9(ne4833)_upregulated
      WBPaper00061527:snt-4_17845-T27C4.1
      WBPaper00061527:Y37D8A.16-F54D1.6_15313
      WBPaper00061651:HSN_enriched
      WBPaper00061651:RIG_enriched
      WBPaper00061651:RIH_enriched
      WBPaper00061902:camt-1(ok515)_regulated_RMG
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00065258:anchor-cell_enriched
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4489_group_19
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026980:intestine_enriched
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00031832:slr-2_regulated
      WBPaper00036286:Pattern_G
      WBPaper00038427:lin-54_embryo_changed
      WBPaper00040210:Chlorpyrifos_24C_regulated
      WBPaper00040858:eQTL_regulated_old
      WBPaper00040876:mir-35_downregulated
      WBPaper00041174:environmental
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_and_environmental
      WBPaper00041211:RPW-24_Up
      WBPaper00045263:0.1mM-paraquat_downregulated
      WBPaper00045960:L1-L4-lethargus_upregulated
      WBPaper00045960:L4-lethargus_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00048989:N2_allantoin_downregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc6390]:Cluster_A
    Interaction (16)
    WBProcess: WBbiopr:00000010
  Map_info: Map: I Position: 21.4343 Error: 0.045075
    Well_ordered
    Positive: Positive_clone: Y87G2A Inferred_automatically: From sequence, transcript, pseudogene data
    Negative: Negative_clone: ZC334 Author_evidence: Ailion EMM
    Mapping_data: 2_point: 7110
      Multi_point: 1695
        1696
        3195
        3983
      Pos_neg_data: 4752
        4753
        4761
        4762
        4763
        10607
  Reference (35)
  Method: Gene