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WormBase Tree Display for Gene: WBGene00006822

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Name Class

WBGene00006822SMapS_parentSequenceC46F11
IdentityVersion1
NameCGC_nameunc-93Person_evidenceWBPerson261
Sequence_nameC46F11.1
Molecular_nameC46F11.1a
C46F11.1a.1
CE30906
C46F11.1b
CE37957
C46F11.1b.1
Other_nameCELE_C46F11.1Accession_evidenceNDBBX284603
Public_nameunc-93
DB_infoDatabaseWormQTLgeneWBGene00006822
WormFluxgeneWBGene00006822
NDBlocus_tagCELE_C46F11.1
PanthergeneCAEEL|WormBase=WBGene00006822|UniProtKB=Q93380
familyPTHR19444
NCBIgene175466
RefSeqproteinNM_001026047.5
NM_001381807.1
SwissProtUniProtAccQ93380
TREEFAMTREEFAM_IDTF314905
UniProt_GCRPUniProtAccQ93380
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:43WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
Reference_alleleWBVar00144047
Allele (189)
Legacy_informationClass 3 allele e1500sd : adults paralysed Egl; slightly long; abnormal muscle; contract and relax when prodded (`rubber-band' phenotype). ES3 ME0. Poor mating in e1500/+ males. NA (Class 3) 2 (n200 : resembles e1500 but less severe phenotype). Class 1 (loss-of-function) alleles n392 : no phenotype alone but fails to complement e1500. Intragenic revertants of e1500 all have Class 1 phenotype probably null alleles e.g. e1500n234amber. NA (Class 1) > 30. See also sup-9 sup-10 sup-11 sup-18.
See also n192, n200, n201, n202, n203, n204, n205, n206, n207, n208, n209, n210, n211, n212, n214, n215, n216, n217, n218, n220, n224, n225, n226, n230, n231, n232, n234, n235, n236, n239, n243, n244, n246, n248, n254, n255, n256, n257, n259, n267, n268, n270, n291, n340, n341, n343, n344, n348, n349, n351, n352, n354, n392, n393, n394, n395, n396, n509, n511, n512, n516, n517, n520, n523, n618, n620, n623, n624, n626, n627, n629, n657, n660, n663, n665, n666, n667, n978, n979, n980, n981, n982, n1011, n1018, n1019, n1021, n1024, n1027
[Reiner D]] Mac-d (Muscle ACtivation-Defective)
[C.elegansII] e1500sd : adults paralysed, Egl; slightly long;abnormal muscle; contract and relax when prodded (`rubber-band' phenotype). Muscle activation defective (flaccid, long).ES3 ME0. Poor mating in e1500/+ males. Neomorphic allele, gf. OA1 (gf): n200(resembles e1500 but less severe phenotype).Both gf alleles suppressed by sup-9, sup-10,sup-11, sup-18. Also lf alleles: n392 (no phenotype alone but fails to complement e1500), n393 etc. Intragenic revertants of e1500 all have similar WT lf phenotype: e1500n234amb, des, e1500n200spo, e1500n243gri, e1500n1415::Tc1, etc. OA>30 (ird). Cloned: 2.2 kb transcripts (slightly different 5'), encoding 700 and 705 aa predicted novel proteins with multiple (5-10) possible TM domains. [Greenwald and Horvitz 1980; Levin and Horvitz 1992;MT]
Strain (31)
RNASeq_FPKM (74)
GO_annotation (16)
Ortholog (39)
Structured_description (2)
Molecular_infoCorresponding_CDSC46F11.1a
C46F11.1b
Corresponding_CDS_historyC46F11.1:wp80
C46F11.1:wp138
C46F11.1:wp140
Corresponding_transcriptC46F11.1a.1
C46F11.1b.1
Other_sequenceFE914682.1
FE913923.1
Dviv_isotig29800
ASC31488_1
JI167429.1
Associated_featureWBsf991851
WBsf991852
WBsf991853
WBsf991854
WBsf224634
Experimental_infoRNAi_result (12)
Expr_patternExpr2773
Expr2775
Expr1019911
Expr1032886
Expr1146588
Expr2017919
Expr2036055
Drives_construct (19)
Construct_product (23)
Microarray_results (23)
Expression_clusterWBPaper00031040:TGF-beta_adult_upregulated
WBPaper00032425:down_in_zfp-1
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:bodywall-muscle_larva_enriched
WBPaper00037950:bodywall-muscle_larva_SelectivelyEnriched
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00045417:128Q-huntingtin_upreglated
WBPaper00045521:Spermatogenic
WBPaper00045861:set-2(ok952)_upregulated
WBPaper00045861:wdr-5(ok1417)_upregulated
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00046805:csr-1(RNAi)_upregulated_Set2
WBPaper00048923:Aging_regulated
WBPaper00050053:muscle_enriched_Day4
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053368:F.oxysporum_regulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00056826:hmc_biased
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058691:cfp-1(tm6369)_upregulated
WBPaper00058711:wdr-5(ok1417)_upregulated
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060871:M.humicola-infection_24h_regulated
WBPaper00061340:mu_int_mu_anal
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:sol-1-jnk-1_18695
WBPaper00061902:camt-1(ok515)_regulated_AFD
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064315:mes-3(bn199)_downregulated_EGCs
WBPaper00064315:mes-4(bn73)_downregulated_EGCs
WBPaper00064721:fasn-1(g14)_downregulated_starved
WBPaper00065841:7_4
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4386_cluster_6_6
cgc4489_group_6
WBPaper00024671:AFD_AWB_vs_unsorted_downregulated
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031003:0hr_muscle_enriched
WBPaper00031003:24hr_muscle_enriched
WBPaper00031003:total_muscle_enriched
WBPaper00035588:alg-1(-)_upregulated
WBPaper00036286:Pattern_F
WBPaper00040184:hcf-1down_sir-2.1down_daf-2down
WBPaper00040210:Chlorpyrifos_24C_regulated
WBPaper00040876:mir-35_downregulated
WBPaper00041174:environmental
WBPaper00041174:environmental_prime
WBPaper00041609:hpl-1_hpl-2_upregulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00053236:Starvation_regulated_GR1307
Interaction (54)
Map_infoMapIIIPosition-5.0882Error0.020586
Well_ordered
PositiveInside_rearrnDf6
nDf7
nDf8
nDf10
nDf11
nDf12
nDf13
nDf14
nDf15
Positive_cloneC46F11Inferred_automaticallyFrom sequence, transcript, pseudogene data
MT#JL932
Mapping_data2_point402
403
6037
6039
6040
Multi_point (46)
Pos_neg_data (11)
Landmark_gene
ReferenceWBPaper00000486
WBPaper00000564
WBPaper00000608
WBPaper00000712
WBPaper00000761
WBPaper00000785
WBPaper00000797
WBPaper00000898
WBPaper00000977
WBPaper00001009
WBPaper00001126
WBPaper00001230
WBPaper00001525
WBPaper00001686
WBPaper00001709
WBPaper00001738
WBPaper00001800
WBPaper00001869
WBPaper00002006
WBPaper00002305
WBPaper00002800
WBPaper00002898
WBPaper00004202
WBPaper00004406
WBPaper00004588
WBPaper00004982
WBPaper00005340
WBPaper00005423
WBPaper00005597
WBPaper00005736
WBPaper00006135
WBPaper00010337
WBPaper00010469
WBPaper00010703
WBPaper00010988
WBPaper00011218
WBPaper00011224
WBPaper00012415
WBPaper00013746
WBPaper00013792
WBPaper00013806
WBPaper00013833
WBPaper00013953
WBPaper00013985
WBPaper00014051
WBPaper00014077
WBPaper00014276
WBPaper00014306
WBPaper00014419
WBPaper00014525
WBPaper00014558
WBPaper00014561
WBPaper00014950
WBPaper00014989
WBPaper00015071
WBPaper00015174
WBPaper00015243
WBPaper00015440
WBPaper00015575
WBPaper00016026
WBPaper00016043
WBPaper00016177
WBPaper00016200
WBPaper00016201
WBPaper00016303
WBPaper00016312
WBPaper00017200
WBPaper00017528
WBPaper00018216
WBPaper00018281
WBPaper00018325
WBPaper00018824
WBPaper00019245
WBPaper00019669
WBPaper00020859
WBPaper00021105
WBPaper00022012
WBPaper00022108
WBPaper00022235
WBPaper00022237
WBPaper00022372
WBPaper00022486
WBPaper00022730
WBPaper00022931
WBPaper00023094
WBPaper00023098
WBPaper00023278
WBPaper00023523
WBPaper00025371
WBPaper00025430
WBPaper00026459
WBPaper00026595
WBPaper00027237
WBPaper00027249
WBPaper00027255
WBPaper00027851
WBPaper00027869
WBPaper00029020
WBPaper00030148
WBPaper00030492
WBPaper00030712
WBPaper00031213
WBPaper00032784
WBPaper00032907
WBPaper00034880
WBPaper00035439
WBPaper00038491
WBPaper00040284
WBPaper00040388
WBPaper00041328
WBPaper00044940
WBPaper00055090
WBPaper00060930
WBPaper00064400
MethodGene