WormBase Tree Display for Gene: WBGene00003134

WBGene00003134 SMap: S_parent: Sequence: F10C5
  Identity: Version: 4
    Name: CGC_name: mat-3 Person_evidence: WBPerson205
      Sequence_name: F10C5.1
      Molecular_name: F10C5.1
        F10C5.1.1
        CE26888
      Other_name: pod-4
        apc-8
        vex-2 CGC_data_submission
        cdc-23 Paper_evidence: WBPaper00010392
        szy-13 Paper_evidence: WBPaper00049084
          Person_evidence: WBPerson728
        CELE_F10C5.1 Accession_evidence: NDB BX284603
      Public_name: mat-3
    DB_info: Database: AceView gene 3B99
        WormQTL gene WBGene00003134
        WormFlux gene WBGene00003134
        NDB locus_tag CELE_F10C5.1
        Panther gene CAEEL|WormBase=WBGene00003134|UniProtKB=Q19294
          family PTHR12558
        NCBI gene 175205
        RefSeq protein NM_064802.7
        SwissProt UniProtAcc Q19294
        TREEFAM TREEFAM_ID TF101055
        UniProt_GCRP UniProtAcc Q19294
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:30 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 01 Mar 2006 08:09:39 WBPerson2970 Event: Acquires_merge: WBGene00077741
              Name_change: Other_name: vex-2
        3 07 May 2009 15:33:27 WBPerson1847 Event: Acquires_merge: WBGene00000385
        4 22 Jan 2016 08:31:00 WBPerson2970 Event: Acquires_merge: WBGene00077741
              Name_change: Other_name: szy-13
      Acquires_merge: WBGene00000385
        WBGene00077741
    Status: Live
  Gene_info (13)
  Molecular_info: Corresponding_CDS: F10C5.1
    Corresponding_transcript: F10C5.1.1
    Other_sequence (25)
    Associated_feature: WBsf224368
      WBsf224369
  Experimental_info: RNAi_result (45)
    Expr_pattern: Expr3590
      Expr1025894
      Expr1031479
      Expr1148188
      Expr2013392
      Expr2031624
    Construct_product: WBCnstr00011514
    Microarray_results (25)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032425:up_in_lin-35
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00041071:spe-44_upregulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Gender_Neutral
      WBPaper00045729:gld-4(RNAi)_downregulated
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049290:rsks-1(sv31)_downregulated
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050522:mafr-1(tm6082)_downregulated
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00051039:germline_enriched
      WBPaper00051265:F1_morc-1(tm6048)_downregulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:alovudine_72h_regulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00053810:nuo-6(qm200)_downregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_downregulated_N2
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058691:cfp-1(tm6369)_downregulated
      WBPaper00058691:set-2(bn129)_downregulated
      WBPaper00058691:WDR-5.1_interacting_protein
      WBPaper00059664:srbc-48(ac23)_downregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060459:bcat-1(RNAi)_downregulated
      WBPaper00060661:sensory-neuron_depleted
      WBPaper00061007:HB101_downregulated
      WBPaper00061007:S.aquatilis_downregulated
      WBPaper00061340:ADA_ADE_grandparent
      WBPaper00061340:AVH_parent
      WBPaper00061340:I2_grandparent
      WBPaper00061340:M1_parent
      WBPaper00061340:Neuroblast_ASG_AWA
      WBPaper00061340:Neuroblast_ASJ_AUA
      WBPaper00061340:Neuroblast_AWC_SAAVx
      WBPaper00061340:Neuroblast_BAG_SMDVx
      WBPaper00061340:Parent_of_hyp1V_and_ant_arc_V
      WBPaper00061340:RME_LR_parent
      WBPaper00061340:URA_parent
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061479:HDA-1_interacting_protein
      WBPaper00061527:F54E7.8-orc-5_6376
      WBPaper00061527:mtr-4_1623-W03F9.10_103
      WBPaper00061527:npp-8_4368-E01B7.1_7741
      WBPaper00061753:csr-1(tor159)_downregulated_25C
      WBPaper00062056:lin-15B(n744)_downregulated
      WBPaper00062056:lin-15B(we23)_downregulated
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062498:PPM-1.D_interacting
      WBPaper00062554:MAGU-2_interacting
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064315:mes-3(bn199)_downregulated_EGCs
      WBPaper00064505:tamoxifen_upregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065149:lin-52(n771)_upregulated
      WBPaper00065373:sek-1(km4)_upregulated_cisplatin
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_1
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00027111:rde-3(ne298)_upregulated
      WBPaper00028482:PA14_downregulated
      WBPaper00031832:slr-2_regulated
      WBPaper00035873:dpy-10_regulated
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00036130:mir-243_down_regulated
      WBPaper00036286:Pattern_B
      WBPaper00037695:WC_5-day
      WBPaper00039866:ClassComp_daf-19_upregulated
      WBPaper00041002:HF_3d_2.0mM_Down
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00045263:isp-1(qm150)_downregulated
      WBPaper00045263:nuo-6(qm200)_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00048989:N2_allantoin_upregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00053550:daf-19(m86)_upregulated_3-fold-embryo
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(23_min)
      [cgc5767]:expression_class_E_pi(41_min)
      [cgc5767]:expression_class_E_pi(53_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
      [cgc6390]:Cluster_F
      [cgc6390]:intrinsic
    Interaction (112)
  Map_info: Map: III Position: -26.8403 Error: 0.003928
    Positive: Positive_clone: F10C5 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: 2_point: 7120
      Multi_point: 3924
        3925
        3926
        4857
        4824
        3736
        3735
      Pos_neg_data: 10571
  Reference: WBPaper00004400
    WBPaper00004484
    WBPaper00005095
    WBPaper00005823
    WBPaper00006435
    WBPaper00010291
    WBPaper00010392
    WBPaper00012524
    WBPaper00015695
    WBPaper00017799
    WBPaper00017951
    WBPaper00018142
    WBPaper00018375
    WBPaper00019721
    WBPaper00019724
    WBPaper00023069
    WBPaper00023148
    WBPaper00024252
    WBPaper00024539
    WBPaper00025832
    WBPaper00027234
    WBPaper00027261
    WBPaper00027274
    WBPaper00028738
    WBPaper00029251
    WBPaper00029303
    WBPaper00030389
    WBPaper00032030
    WBPaper00032281
    WBPaper00032519
    WBPaper00033077
    WBPaper00033564
    WBPaper00037671
    WBPaper00038491
    WBPaper00038690
    WBPaper00039279
    WBPaper00043405
    WBPaper00050507
    WBPaper00055090
    WBPaper00059904
    WBPaper00062120
    WBPaper00065848
  Remark: Sequence connection from [Golden A] krb 02/03/28
  Method: Gene