WormBase Tree Display for Gene: WBGene00001677

WBGene00001677 SMap: S_parent: Sequence: M04C7
  Identity: Version: 1
    Name: CGC_name: gpa-15 Person_evidence: WBPerson625
      Sequence_name: M04C7.1
      Molecular_name: M04C7.1
        M04C7.1.1
        CE28623
      Other_name: CELE_M04C7.1 Accession_evidence: NDB BX284601
      Public_name: gpa-15
    DB_info: Database: AceView gene 1J108
        WormQTL gene WBGene00001677
        WormFlux gene WBGene00001677
        NDB locus_tag CELE_M04C7.1
        Panther gene CAEEL|WormBase=WBGene00001677|UniProtKB=P91907
          family PTHR10218
        NCBI gene 172645
        RefSeq protein NM_059911.3
        SwissProt UniProtAcc P91907
        UniProt_GCRP UniProtAcc P91907
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:25 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gpa
    Allele (36)
    Strain: WBStrain00028630
      WBStrain00028631
      WBStrain00028941
    RNASeq_FPKM (74)
    GO_annotation (15)
    Ortholog (38)
    Paralog (21)
    Structured_description: Concise_description: gpa-15 encodes a member of the G protein alpha subunit family of heterotrimeric GTPases; it is expressed in ADL, ASH, ASK, PHA, PHB, the distal tip cell, the anchor cell, and many male-specific neurons. Curator_confirmed: WBPerson48
            WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-modulating G protein-coupled receptor signaling pathway. Located in non-motile cilium. Expressed in chemosensory neurons and hermaphrodite somatic gonadal cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: M04C7.1
    Corresponding_CDS_history: M04C7.1:wp56
    Corresponding_transcript: M04C7.1.1
    Other_sequence: CJC16062_1
    Associated_feature: WBsf663818
      WBsf664576
      WBsf219941
  Experimental_info: RNAi_result: WBRNAi00034420 Inferred_automatically: RNAi_primary
      WBRNAi00004024 Inferred_automatically: RNAi_primary
      WBRNAi00050895 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1315
      Expr1025840
      Expr1030998
      Expr1154591
      Expr2012186
      Expr2030422
    Drives_construct: WBCnstr00000157
      WBCnstr00000615
      WBCnstr00001695
      WBCnstr00004953
      WBCnstr00005996
      WBCnstr00014454
      WBCnstr00036779
    Construct_product: WBCnstr00001695
      WBCnstr00010212
      WBCnstr00036779
    Microarray_results (19)
    Expression_cluster: WBPaper00037950:all-neurons_CoreEnriched
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_larva_enriched
      WBPaper00037950:all-neurons_larva_SelectivelyEnriched
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00040560:hpl-2_embryo_upregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Spermatogenic
      WBPaper00046805:csr-1(RNAi)_upregulated_Set1
      WBPaper00049377:MWCNT_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:isp-1(qm150)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00054493:hpl-2(tm1489)_downregulated
      WBPaper00055103:thoc-5(wy822)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Psora_upregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Psora_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00055941:nuo-6(qm200)_upregulated
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056826:hmc_biased
      WBPaper00058598:mex-1(or286)_downregulated
      WBPaper00058691:cfp-1(tm6369)_downregulated
      WBPaper00058691:sin-3(tm1276)_downregulated
      WBPaper00059605:mut-16(pk710)_downregulated
      WBPaper00059839:S.maltophilia_regulated
      WBPaper00060084:cco-1(RNAi)_upregulated_lin-40(yth27)
      WBPaper00060273:isp-1(qm150)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060764:swsn-1(os22ts)_upregulated
      WBPaper00060909:atfs-1(et18)_upregulated
      WBPaper00061340:g1A_parent
      WBPaper00061340:mc3
      WBPaper00061340:Parent_of_tail_spike_and_hyp10
      WBPaper00061340:Pharyngeal_marginal_cell
      WBPaper00061340:pm3_pm4_pm5
      WBPaper00061340:pm7
      WBPaper00061340:Rectal_cell
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061479:mep-1(ne4629)_upregulated
      WBPaper00061527:rab-28-jbts-14_9542
      WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
      WBPaper00062103:neuron_enriched
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062590:Aging_upregulated_neuron
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064130:Beta-Amyloid_24h_downregulated_mRNA
      WBPaper00064494:postdauer_upregulated_AWA
      WBPaper00064637:cox-5B(RNAi)_upregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00065005:sams-3(RNAi)_downregulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065578:gcn-1(nc40)_upregulated
      WBPaper00065841:63_0
      WBPaper00065841:85_0
      WBPaper00066038:mip-1(how5)_downregulated
      cgc4386_cluster_6_4
      WBPaper00027111:eri-1(mg366)_upregulated
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00030985:Enterococcus_faecalis_upregulated
      WBPaper00030985:Erwinia_carotovora_upregulated
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00036123:Cadmium_regulated
      WBPaper00036286:Pattern_F
      WBPaper00037695:WC_5-day
      WBPaper00040426:CYE-1_CDK-2AF_downregulated
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00042548:miRISC_enriched
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00048637:lin-35(n745)_starvation_downregulated
    Interaction (11)
  Map_info: Map: I Position: 2.92947 Error: 0.00985
    Positive: Positive_clone: M04C7 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4381
        5041
    Pseudo_map_position
  Reference: WBPaper00002880
    WBPaper00003465
    WBPaper00004366
    WBPaper00006103
    WBPaper00006194
    WBPaper00011741
    WBPaper00022401
    WBPaper00024990
    WBPaper00028950
    WBPaper00029015
    WBPaper00029025
    WBPaper00031303
    WBPaper00031936
    WBPaper00035254
    WBPaper00040879
    WBPaper00043908
    WBPaper00056744
    WBPaper00064634
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene