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WormBase Tree Display for Gene: WBGene00000253

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Name Class

WBGene00000253EvidenceCGC_data_submission
SMapS_parentSequenceCHROMOSOME_I
IdentityVersion2
NameCGC_namebli-3Person_evidenceWBPerson261
Sequence_nameF56C11.1
Molecular_nameF56C11.1
F56C11.1.1
CE28463
F56C11.1.2
Other_nametag-31CGC_data_submission
duox-1Paper_evidenceWBPaper00004841
WBPaper00006395
Person_evidenceWBPerson56
CELE_F56C11.1Accession_evidenceNDBBX284601
Public_namebli-3
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change (2)
StatusLive
Gene_info (11)
Disease_infoExperimental_modelDOID:9281
Potential_modelDOID:0050328Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:13273)
DOID:8577Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:13273)
DOID:1498Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:13273)
DOID:8778Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:13273)
DOID:0112189Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:13273)
Models_disease_assertedWBDOannot00000626
Molecular_infoCorresponding_CDSF56C11.1
Corresponding_transcriptF56C11.1.1
F56C11.1.2
Other_sequence (17)
Associated_featureWBsf717434
WBsf982412
WBsf982413
WBsf982414
WBsf1009036
WBsf218873
WBsf218874
Experimental_infoRNAi_result (35)
Expr_patternExpr2613
Expr15757
Expr1010236
Expr1030163
Expr1152411
Expr2009629
Expr2027868
Drives_constructWBCnstr00021138
WBCnstr00037626
WBCnstr00042508
Construct_productWBCnstr00015484
WBCnstr00015485
WBCnstr00015489
WBCnstr00015491
WBCnstr00037626
AntibodyWBAntibody00000404
WBAntibody00002391
WBAntibody00002392
Microarray_results (21)
Expression_clusterWBPaper00030922:glycosylated_protein
WBPaper00031040:Cluster_5
WBPaper00031040:TGF-beta_adult_upregulated
WBPaper00036291:ung-1_regulated
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:hypodermis_larva_SelectivelyEnriched
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(gk119)_upregulated
WBPaper00045521:Gender_Neutral
WBPaper00045934:wrn-1(gk99)_downregulated
WBPaper00046121:mesoderm_unique
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046805:csr-1(RNAi)_downregulated_Set1
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049732:blmp-1(tm548)_vs_N2_upregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00051558:aging_regulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053388:dauer_regulated_Cluster3
WBPaper00053615:SMO-1_target
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055648:male-tail_expressed
WBPaper00055971:nhl-2(ok818)_20C_upregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056826:SGP_biased
WBPaper00056855:his-72(uge40)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061007:HB101_upregulated
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:ILso
WBPaper00061340:Seam_cell
WBPaper00061527:Y37D8A.16-F54D1.6_15313
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
WBPaper00064716:paraquat_downregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065841:0_0
WBPaper00065841:30_2
WBPaper00065841:30_5
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
cgc4386_cluster_4_6
cgc4489_group_22
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00031252:AIN-1_IP_enriched
WBPaper00035504:daf-2(e1370)_upregulated
WBPaper00036286:Pattern_I
WBPaper00037113:Chlorpyrifos_Diazinon_16C_regulated
WBPaper00037695:DD_3-day
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
WBPaper00040210:Diazinon_24C_regulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00041939:control_vs_EtBr-exposed_24h
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_3h
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00053236:Starvation_regulated_GR1307
[cgc6390]:Cluster_B
Interaction (22)
WBProcessWBbiopr:00000039
WBbiopr:00000096
Map_infoMapIPosition-19.1485Error0.002825
Well_ordered
PositiveInside_rearrsDp2
Positive_cloneF56C11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_data2_point1
2504
3941
4741
6080
7166
7167
7169
Multi_point (18)
Pos_neg_data6276
1026
955
4553
4554
4555
4556
Landmark_gene
ReferenceWBPaper00000031
WBPaper00000608
WBPaper00000976
WBPaper00001057
WBPaper00001328
WBPaper00001558
WBPaper00001747
WBPaper00001848
WBPaper00002339
WBPaper00004841
WBPaper00005747
WBPaper00006395
WBPaper00013709
WBPaper00013777
WBPaper00014382
WBPaper00014628
WBPaper00015350
WBPaper00016398
WBPaper00016504
WBPaper00021035
WBPaper00026596
WBPaper00027824
WBPaper00031861
WBPaper00033104
WBPaper00033201
WBPaper00033445
WBPaper00037626
WBPaper00037681
WBPaper00037982
WBPaper00038491
WBPaper00041110
WBPaper00041408
WBPaper00041607
WBPaper00041912
WBPaper00043278
WBPaper00044212
WBPaper00044344
WBPaper00044770
WBPaper00044963
WBPaper00046075
WBPaper00046081
WBPaper00046705
WBPaper00051455
WBPaper00051549
WBPaper00051802
WBPaper00055090
WBPaper00055154
WBPaper00055350
WBPaper00056090
WBPaper00059068
WBPaper00059817
WBPaper00059960
WBPaper00062245
WBPaper00064291
WBPaper00064539
WBPaper00065026
WBPaper00065123
WBPaper00065304
RemarkGene name created from parsing 'genotype' field from CGC strain informationCGC_data_submission
MethodGene