WormBase Tree Display for Gene: WBGene00015281

WBGene00015281 SMap: S_parent: Sequence: C01B10
  Identity: Version: 1
    Name: Sequence_name: C01B10.7
      Molecular_name: C01B10.7a
        C01B10.7a.1
        CE44717
        C01B10.7b
        CE49231
        C01B10.7b.1
      Other_name: CELE_C01B10.7 Accession_evidence: NDB BX284604
      Public_name: C01B10.7
    DB_info: Database: AceView gene 4H403
        WormQTL gene WBGene00015281
        WormFlux gene WBGene00015281
        NDB locus_tag CELE_C01B10.7
        Panther gene CAEEL|WormBase=WBGene00015281|UniProtKB=Q17538
          family PTHR35182
        NCBI gene 182060
        RefSeq protein NM_001306775.3
            NM_068624.3
        TrEMBL UniProtAcc V6CL84
            Q17538
        UniProt_GCRP UniProtAcc Q17538
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (29)
    RNASeq_FPKM (74)
    Ortholog (21)
    Paralog: WBGene00009056 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00010216 Caenorhabditis elegans From_analysis: Panther
      WBGene00010512 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00010513 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00010514 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00010515 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00010516 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00010518 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00020589 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00022230 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00044516 Caenorhabditis elegans From_analysis: Panther
      WBGene00020871 Caenorhabditis elegans From_analysis: Panther
      WBGene00017128 Caenorhabditis elegans From_analysis: Panther
      WBGene00017127 Caenorhabditis elegans From_analysis: Panther
      WBGene00015476 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Enriched in amphid sheath cell based on RNA-seq studies. Is affected by several genes including daf-2; daf-12; and rrf-3 based on tiling array; microarray; and RNA-seq studies. Is affected by five chemicals including aldicarb; Tunicamycin; and cholesterol based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C01B10.7a
      C01B10.7b
    Corresponding_CDS_history: C01B10.7:wp212
    Corresponding_transcript: C01B10.7a.1
      C01B10.7b.1
  Experimental_info: RNAi_result: WBRNAi00009882 Inferred_automatically: RNAi_primary
      WBRNAi00039242 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021020
      Expr1143383
      Expr2000270
      Expr2018491
    Drives_construct: WBCnstr00028962
    Construct_product: WBCnstr00028962
    Microarray_results (15)
    Expression_cluster: WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038061:aldicarb_upregulated
      WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
      WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
      WBPaper00044736:oscillating_dev_expression
      WBPaper00044760:somatic_specific
      WBPaper00045257:bar-1(ga80)_downregulated
      WBPaper00045390:tunicamycin_upregulated
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00045774:clk-1_downregulated
      WBPaper00046012:tdp-1(ok803)_upregulated
      WBPaper00049489:AMsh-glia_enriched
      WBPaper00050193:met-2(n4256)set-25(n5021)_downregulated_L1
      WBPaper00050370:dpy-21(e428)_L3_downregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00055013:hmg-3(bar24)_downregulated
      WBPaper00055226:adr-1(tm668)_upregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00055971:nhl-2(ok818)_20C_downregulated
      WBPaper00056169:rrf-3(pk1426)_upregulated_L1
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00059605:mut-16(pk710)_upregulated
      WBPaper00059728:20ug_cholesterol_upregulated
      WBPaper00059987:Wounding_downregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060434:pH4.33_vs_pH6.33_uprgulated
      WBPaper00060445:ikb-1(nr2027)_downregulated_L4
      WBPaper00060445:nfki-1(cer1)_downregulated_L4
      WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_downregulated_L4
      WBPaper00060764:swsn-9(ok1354)_downregulated
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061527:F53B1.6_3658-ZK829.3_3484
      WBPaper00061651:AMsh_enriched
      WBPaper00061651:PHsh_enriched
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00062197:mec-8_downregulated
      WBPaper00064539:nhr-114(gk849)_downregulated
      WBPaper00064632:daf-2(e1370)_downregulated_intestine
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
      WBPaper00065199:Transgeneration-starvation_regulated_starved
      WBPaper00065288:mdt-15(tm2182)_downregulated
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00065841:45_0
      cgc4489_group_4
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00036286:Pattern_G
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00045673:colistin_downregulated
      WBPaper00055899:nitroguanidine_regulated
      WBPaper00056330:mrps-5(RNAi)_upregulated
    Interaction: WBInteraction000419235
  Map_info: Positive: Positive_clone: C01B10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 3.21836
  Method: Gene