WormBase Tree Display for Gene: WBGene00015803

WBGene00015803 SMap: S_parent: Sequence: C15H9
  Identity: Version: 1
    Name: Sequence_name: C15H9.9
      Molecular_name: C15H9.9
        C15H9.9.1
        CE04001
      Other_name: CELE_C15H9.9 Accession_evidence: NDB BX284606
      Public_name: C15H9.9
    DB_info: Database: AceView gene XG746
        WormQTL gene WBGene00015803
        WormFlux gene WBGene00015803
        NDB locus_tag CELE_C15H9.9
        Panther gene CAEEL|WormBase=WBGene00015803|UniProtKB=Q18032
          family PTHR33562
        NCBI gene 180885
        RefSeq protein NM_076628.6
        TREEFAM TREEFAM_ID TF322590
        TrEMBL UniProtAcc Q18032
        UniProt_GCRP UniProtAcc Q18032
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (13)
    RNASeq_FPKM (74)
    GO_annotation: 00121580
      00121581
      00121582
    Ortholog: WBGene00118229 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00035230 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00051563 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00163110 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00111486 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00209635 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00222489 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g3318 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5676 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g21980 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g10652 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g2619 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g16089 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g222 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g5782 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g7249 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g13966 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00157.g5823 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-C15H9.9 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold626.g6510 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00209.g7095 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00408 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024525 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g14852 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g2908 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0229400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19177 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00245353 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00264340 Strongyloides ratti From_analysis: WormBase-Compara
      FB:FBgn0032421 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0033872 Drosophila melanogaster From_analysis: Hieranoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Paralog: WBGene00019662 Caenorhabditis elegans From_analysis: Panther
      WBGene00019663 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to be involved in regulation of cholinergic synaptic transmission and sleep. Expressed in marginal cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C15H9.9
    Corresponding_transcript: C15H9.9.1
    Other_sequence: CJC00404_1
      AYC01026_1
      Oden_isotig22140
      Tcol_isotig04128
      BU666431.1
      NAC01039_1
      Tcir_isotig07792
      AE00800
      CBC11070_1
      Acan_isotig12457
    Associated_feature: WBsf654047
      WBsf654048
      WBsf654049
      WBsf670599
      WBsf717335
      WBsf1005486
      WBsf1005487
      WBsf237443
      WBsf237444
      WBsf237445
  Experimental_info: RNAi_result: WBRNAi00040640 Inferred_automatically: RNAi_primary
      WBRNAi00028937 Inferred_automatically: RNAi_primary
      WBRNAi00010807 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr3432
      Expr1017154
      Expr1036764
      Expr1144694
      Expr2000835
      Expr2019052
    Drives_construct: WBCnstr00011398
      WBCnstr00028553
    Construct_product: WBCnstr00028553
    Microarray_results (20)
    Expression_cluster: WBPaper00024505:pharyngeal_enriched
      WBPaper00028451:Low_abundance_spermatogenesis_enriched
      WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00032528:L3_enriched
      WBPaper00033065:clk-1(qm30)_upregulated
      WBPaper00035269:cde-1_regulated
      WBPaper00037682:sma-2_downregulated
      WBPaper00037946:LIN-39_interacting
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044746:aging_downregulated_Day5
      WBPaper00044746:aging_downregulated_HeatShock
      WBPaper00045521:Spermatogenic
      WBPaper00045571:germline-ablation_upregulated
      WBPaper00046121:mesoderm_unique
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00046509:htz-1(ok3099)_downregulated
      WBPaper00046509:lin-35(n745)_downregulated
      WBPaper00047132:skn-1(RNAi)_downregulated
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00049018:swsn-2.2(RNAi)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050053:muscle_enriched_Day4
      WBPaper00050080:rbr-2(tm3141)_upregulated
      WBPaper00050094:glp-1(gf)_upregulated
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_100-cell-embryo
      WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
      WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo
      WBPaper00050332:skn-1(RNAi)_downregulated
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050743:elli-1(sam-3)_upregulated
      WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051558:aging_regulated
      WBPaper00053388:dauer_regulated_Cluster5
      WBPaper00053599:female_vs_male_upregulated
      WBPaper00053599:oocyte_vs_mitosis_downregulated
      WBPaper00053615:SMO-1_target
      WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
      WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00053814:25C_downregulated_OP50
      WBPaper00054189:aging_regulated_protein
      WBPaper00054189:P.aeruginosa_regulated_protein
      WBPaper00054192:cold-shock_downregulated
      WBPaper00055049:S.gordonii_downregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Psora_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055565:AVK_enriched
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00055971:nhl-2(ok818)_20C_downregulated
      WBPaper00056284:ints-2(RNAi)_downregulated
      WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
      WBPaper00056443:DietaryRestriction_downregulated
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00056826:hmc_biased
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058691:set-2(bn129)_upregulated
      WBPaper00058942:henn-1(pk2295)_upregulated
      WBPaper00059471:EGL-43_interacting
      WBPaper00059604:fluvastatin_upregulated_dlk-1(km12)
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059987:Wounding_downregulated
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061040:FW1256_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:ALA
      WBPaper00061340:AVB
      WBPaper00061340:hmc
      WBPaper00061340:hmc_homolog
      WBPaper00061340:pm1_pm2
      WBPaper00061340:PVP
      WBPaper00061340:RIA
      WBPaper00061340:RIB
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061527:mup-2-unc-87_284
      WBPaper00061651:AIZ_enriched
      WBPaper00061651:ALA_enriched
      WBPaper00061651:ALM_enriched
      WBPaper00061651:AVL_enriched
      WBPaper00061651:AVM_enriched
      WBPaper00061651:Gonadal_sheath_cell_enriched
      WBPaper00061651:HSN_enriched
      WBPaper00061651:I1_enriched
      WBPaper00061651:I3_enriched
      WBPaper00061651:I4_enriched
      WBPaper00061651:M1_enriched
      WBPaper00061651:M2_enriched
      WBPaper00061651:M3_enriched
      WBPaper00061651:MI_enriched
      WBPaper00061651:NSM_enriched
      WBPaper00061651:PLM_enriched
      WBPaper00061651:PVM_enriched
      WBPaper00061651:PVW_enriched
      WBPaper00061651:RIA_enriched
      WBPaper00061651:RID_enriched
      WBPaper00061818:AFD_enriched_protein
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064005:starvation_downregulated_N2_mRNA
      WBPaper00064055:trl-1(cas1077)_downregulated_non-starved
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00065086:JU1400_N.ferruginous_regulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065149:lin-52(n771)_downregulated
      WBPaper00065373:sek-1(km4)_downregulated_Ref
      WBPaper00065835:Day11_vs_Day1_downregulated
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066085:sin-3(tm1276)_upregulated
      WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
      cgc4386_cluster_2_6
      cgc4489_group_4
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00030839:Embryo_A_Class
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030985:Serratia_marcesens_downregulated
      WBPaper00031003:0hr_muscle_enriched
      WBPaper00031003:24hr_muscle_enriched
      WBPaper00031003:hlh_1_enriched
      WBPaper00031003:total_muscle_enriched
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00032062:age_regulated_genes
      WBPaper00036286:Pattern_C
      WBPaper00037695:WC_5-day
      WBPaper00038231:Cry5B_1.5-fold_downregulated
      WBPaper00038427:lin-54_germline_changed
      WBPaper00040426:CYD-1_CDK-4_downregulated
      WBPaper00040426:CYE-1_CDK-2AF_downregulated
      WBPaper00040963:TA100_up
      WBPaper00040963:TA300_up
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_24h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00042128:gei-8(ok1671)_downregulated
      WBPaper00045673:colistin_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00053236:daf-16(mgDF50)_regulated_Starved
      WBPaper00053236:Starvation_regulated_N2
    Interaction (16)
  Map_info: Positive: Positive_clone: C15H9 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X -3.67381
  Method: Gene