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WormBase Tree Display for Gene: WBGene00000267

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Name Class

WBGene00000267EvidencePaper_evidenceWBPaper00006229
SMapS_parentSequenceY39E4B
IdentityVersion1
NameCGC_namebre-2Person_evidenceWBPerson26
Sequence_nameY39E4B.9
Molecular_nameY39E4B.9a
Y39E4B.9a.1
CE36339
Y39E4B.9b
CE21720
Y39E4B.9c
CE43685
Y39E4B.9d
CE44325
Y39E4B.9a.2
Y39E4B.9b.1
Y39E4B.9c.1
Y39E4B.9d.1
Other_nameCELE_Y39E4B.9Accession_evidenceNDBBX284603
Public_namebre-2
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbre
Allele (78)
Legacy_information[Marroquin LD, Aroian RV ] Resistant to Bt toxin, Cry5B
StrainWBStrain00008569
RNASeq_FPKM (74)
GO_annotation (15)
Ortholog (35)
Paralog (18)
Structured_descriptionConcise_descriptionbre-2 is required for Cry5B toxicity.Paper_evidenceWBPaper00004264
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable acetylglucosaminyltransferase activity. Involved in response to toxic substance. Predicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY39E4B.9a
Y39E4B.9b
Y39E4B.9c
Y39E4B.9d
Corresponding_CDS_historyY39E4B.9:wp117
Corresponding_transcriptY39E4B.9a.1
Y39E4B.9a.2
Y39E4B.9b.1
Y39E4B.9c.1
Y39E4B.9d.1
Other_sequenceJI481070.1
JI481081.1
Associated_featureWBsf666496
WBsf667566
WBsf227718
WBsf227719
Experimental_infoRNAi_resultWBRNAi00117471Inferred_automaticallyRNAi_primary
WBRNAi00036951Inferred_automaticallyRNAi_primary
WBRNAi00056251Inferred_automaticallyRNAi_primary
WBRNAi00006871Inferred_automaticallyRNAi_primary
WBRNAi00091463Inferred_automaticallyRNAi_primary
Expr_patternExpr1013572
Expr1159735
Expr2009652
Expr2027891
Microarray_results (23)
Expression_clusterWBPaper00037950:all-neurons_embryo_enriched
WBPaper00037950:all-neurons_embryo_SelectivelyEnriched
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:coelomocytes_embryo_enriched
WBPaper00037950:coelomocytes_embryo_SelectivelyEnriched
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00042561:smgl-1(RNAi)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00048923:Aging_regulated
WBPaper00048988:daf-2(e1370)_upregulated_neuron
WBPaper00048988:neuron_expressed
WBPaper00049001:EVN_enriched
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00050193:met-2(n4256)set-25(n5021)_upregulated_L1
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050504:hrp-2(RNAi)_downregulated
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:body-muscle_expressed
WBPaper00050990:intestine_expressed
WBPaper00051257:Levamisole_upregulated
WBPaper00051558:aging_regulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:alovudine_24h_regulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053664:ins-11(tm1053)_downregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00055226:ADR-2_target_N2
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056826:hmc_biased
WBPaper00057068:ints-4(RNAi)_downregulated
WBPaper00057068:ints-4(RNAi)_downregulated_Cadmium
WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_downregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059839:S.maltophilia_regulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:g1A
WBPaper00061340:g1P
WBPaper00061340:Parent_of_K_Kprime
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061527:nhr-107_19485-nhr-109_3743
WBPaper00061651:AIN_enriched
WBPaper00061651:SDQ_enriched
WBPaper00062056:dpl-1(n2994)_upregulated
WBPaper00062056:lin-15B(n744)_upregulated
WBPaper00062056:lin-15B(we23)_upregulated
WBPaper00062056:lin-35(n745)_upregulated
WBPaper00062056:lin-37(n758)_upregulated
WBPaper00062056:met-2(n4256)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00065029:cadmium_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065149:lin-52(n771)_upregulated
WBPaper00065158:AFD_enriched
WBPaper00065841:25_0
WBPaper00065841:25_1
WBPaper00065841:41_0
WBPaper00065841:41_2
WBPaper00065841:51_0
WBPaper00065841:51_1
WBPaper00065841:91_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031184:acrylamide_downregulated
WBPaper00031252:AIN-2_IP_enriched
WBPaper00034757:up_by_oxidative_stress
WBPaper00037695:WC_5-day
WBPaper00040963:Q200_down
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00048637:lin-35(n745)_starvation_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00055899:nitroguanidine_regulated
[cgc5376]:let-60(G12V)-regulated_genes
Interaction (19)
WBProcessWBbiopr:00000008
Map_infoMapIIIPosition20.8352Error0.038648
PositivePositive_cloneY39E4BInferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point3916
4768
5286
Reference (16)
RemarkData extracted from Marroquin et al. (2000)
MethodGene