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WormBase Tree Display for Gene: WBGene00011743

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Name Class

WBGene00011743SMapS_parentSequenceT13F2
IdentityVersion1
NameSequence_nameT13F2.2
Molecular_nameT13F2.2
T13F2.2.1
CE13621
Other_nameCELE_T13F2.2Accession_evidenceNDBBX284604
Public_nameT13F2.2
DB_infoDatabaseAceViewgene4K562
WormQTLgeneWBGene00011743
WormFluxgeneWBGene00011743
NDBlocus_tagCELE_T13F2.2
PanthergeneCAEEL|WormBase=WBGene00011743|UniProtKB=Q94045
familyPTHR13215
NCBIgene188475
RefSeqproteinNM_069349.7
SwissProtUniProtAccQ94045
TREEFAMTREEFAM_IDTF313859
UniProt_GCRPUniProtAccQ94045
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (11)
RNASeq_FPKM (74)
GO_annotation00086937
00086938
00086939
00086940
00086941
00118979
00118980
00118981
00118982
Contained_in_operonCEOP4624
Ortholog (29)
Structured_descriptionAutomated_descriptionEnables transcription coactivator activity. Involved in RNA polymerase II promoter clearance. Predicted to be located in nucleus. Is an ortholog of human SUB1 (SUB1 regulator of transcription).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST13F2.2
Corresponding_transcriptT13F2.2.1
Other_sequenceCRC10439_1
CR02943
CBC12389_1
Associated_featureWBsf652084
WBsf652085
WBsf652086
WBsf997480
WBsf230622
Experimental_infoRNAi_resultWBRNAi00053269Inferred_automaticallyRNAi_primary
WBRNAi00018676Inferred_automaticallyRNAi_primary
WBRNAi00008260Inferred_automaticallyRNAi_primary
WBRNAi00035540Inferred_automaticallyRNAi_primary
Expr_patternExpr1023970
Expr1035168
Expr1156855
Expr2006154
Expr2024369
Drives_constructWBCnstr00030423
Construct_productWBCnstr00030423
Microarray_results (18)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032097:CGH-1-associated-mRNA
WBPaper00033065:isp-1-1(qm150)_upregulated
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_embryo_enriched
WBPaper00038118:aak-2(gt33)_upregulated
WBPaper00038118:stress_upregulated_N2
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045420:fertilization_downregulated_protein
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_downregulated
WBPaper00045774:clk-1_downregulated
WBPaper00047132:skn-1(RNAi)_downregulated_glp-1(ts)-dependent
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050468:hlh-30-dependent_Cry5B_regulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00051245:epidermis_nucleus_expressed
WBPaper00051245:intestine_nucleus_expressed
WBPaper00051245:nucleus_specific
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_L1_SMARTseq
WBPaper00053810:daf-2(e1370)_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00055049:S.gordonii_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055648:germline_expressed
WBPaper00056039:hda-6(ok3203)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00057288:Cold_downregulated_protein
WBPaper00058598:mex-3(eu149)_downregulated
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058691:cfp-1(tm6369)_upregulated
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060886:spr-5(by101)_upregulated
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061203:spr-1(ok2144)_downregulated
WBPaper00061527:cyn-10_19153-K12H4.2
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062554:MAGU-2_interacting
WBPaper00062590:Aging_upregulated_coelomocyte
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064716:paraquat_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4386_cluster_3_2
cgc4489_group_2
cgc4489_hermaphrodite_enriched_transcription_factors
WBPaper00025032:cluster_6
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030985:Serratia_marcesens_downregulated
WBPaper00035905:FBF-1_Associated
WBPaper00036286:Pattern_B
WBPaper00037695:LD_3-day
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040876:mir-35_upregulated
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00042128:gei-8(ok1671)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045960:L1-L4-lethargus_downregulated
WBPaper00045960:L4-lethargus_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
[cgc5767]:cluster_1
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MD_pd(23_min)
[cgc5767]:expression_class_SM
[cgc5767]:expression_class_SMD
[cgc6390]:oogenesis-enriched
InteractionWBInteraction000043899
WBInteraction000120133
WBInteraction000159257
WBInteraction000165100
WBInteraction000172920
WBInteraction000173445
WBInteraction000174317
WBInteraction000210621
WBInteraction000214655
WBInteraction000230977
WBInteraction000270518
WBInteraction000276259
WBInteraction000276268
WBInteraction000288384
WBInteraction000300178
WBInteraction000321980
WBInteraction000339914
WBInteraction000342114
WBInteraction000350721
WBInteraction000360110
WBInteraction000393043
WBInteraction000393138
WBInteraction000394684
WBInteraction000394798
WBInteraction000400755
WBInteraction000410394
WBInteraction000567723
WBInteraction000576724
WBInteraction000579268
WBInteraction000585601
Map_infoPositivePositive_cloneT13F2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV4.4188
ReferenceWBPaper00032961
WBPaper00038491
WBPaper00045860
WBPaper00055090
WBPaper00065308
MethodGene