WormBase Tree Display for Gene: WBGene00010281

WBGene00010281 SMap: S_parent: Sequence: F58G11
  Identity: Version: 3
    Name (5)
    DB_info: Database: AceView gene 5O150
        WormQTL gene WBGene00010281
        WormFlux gene WBGene00010281
        NDB locus_tag CELE_F58G11.3
        NCBI gene 179856
        RefSeq protein NR_003171.1
            NM_001047670.5
        TrEMBL UniProtAcc P90898
        UniProt_GCRP UniProtAcc P90898
        RNAcentral URSid URS000053EBB4
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 08 Jul 2021 09:46:42 WBPerson1983 Name_change: CGC_name: mip-2
        3 09 Dec 2021 11:50:30 WBPerson1983 Name_change: Other_name: eggd-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mip
    Allele (47)
    Possibly_affected_by: WBVar02156965
    Strain: WBStrain00049038
    RNASeq_FPKM (74)
    Ortholog (21)
    Paralog: WBGene00008005 Caenorhabditis elegans From_analysis: Inparanoid_8
            WormBase-Compara
    Structured_description: Automated_description: Expressed in P0; Psub1; Psub2; Psub3; and spermatocyte. Is predicted to encode a protein with the following domain: Phosphorylation site. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F58G11.3a
    Corresponding_transcript: F58G11.3b
      F58G11.3a.1
    Other_sequence: CBC08704_1
    Associated_feature: WBsf653331
      WBsf234847
      WBsf234848
  Experimental_info: RNAi_result: WBRNAi00062286 Inferred_automatically: RNAi_primary
      WBRNAi00033130 Inferred_automatically: RNAi_primary
      WBRNAi00049044 Inferred_automatically: RNAi_primary
      WBRNAi00016008 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr15824
      Expr15826
      Expr15828
      Expr15829
      Expr1028690
      Expr1034484
      Expr1152786
      Expr2004416
      Expr2022639
    Drives_construct: WBCnstr00031531
    Construct_product: WBCnstr00031531
    Microarray_results (21)
    Expression_cluster: WBPaper00029047:atx-3_upregulated
      WBPaper00032031:DConiospora_upregulated_cDNA_24h
      WBPaper00035269:cde-1_regulated
      WBPaper00037682:sma-2_sma-4_downregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:germline-precursors_embryo_enriched
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:rising_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00044786:emr-1(gk119)_downregulated
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
      WBPaper00045417:128Q-huntingtin_upreglated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045486:starvation_downregulated
      WBPaper00045521:Gender_Neutral
      WBPaper00045571:germline-ablation_downregulated
      WBPaper00045774:clk-1_upregulated
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00048611:MnCl2_downregulated
      WBPaper00048988:daf-2(e1370)_daf-16(mu86)_downregulated_neuron
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_6
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00049954:BPS_downregulated
      WBPaper00050080:rbr-2(tm3141)_downregulated
      WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050522:mafr-1(tm6082)_downregulated
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:GABAergic-neuron_enriched
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051265:F4_morc-1(tm6048)_upregulated
      WBPaper00051558:aging_regulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053295:lin-22(icb38)_downregulated
      WBPaper00053302:alovudine_24h_regulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_L1_SMARTseq
      WBPaper00053321:PGCs_enriched_NuGen
      WBPaper00053388:dauer_regulated_Cluster2
      WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
      WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
      WBPaper00053713:Starvation-induced_postdauer_vs_control_downregulated
      WBPaper00054191:H3.3(null)_L1_upregulated
      WBPaper00055103:thoc-5(wy822)_downregulated
      WBPaper00055226:ADR-2_target_N2
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055354:Rapamycin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056034:pals-22(jy3)_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056275:P.aeruginosa_upregulated
      WBPaper00056275:P.aeruginosa_upregulated_atf-7(qd22qd130)_dependent
      WBPaper00056284:ints-5(RNAi)_downregulated
      WBPaper00056290:hsp-6(mg585)_downregulated
      WBPaper00056443:sek-1(km4)_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056826:hmc_biased
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058598:sin-3(tm1276)_upregulated
      WBPaper00058691:sin-3(tm1276)_upregulated
      WBPaper00059027:neuron-synapses_enriched
      WBPaper00059174:MEG-3_interacting
      WBPaper00059605:MUT-16_interacting
      WBPaper00059664:srbc-48(ac23)_downregulated
      WBPaper00059895:wounding_downregulated
      WBPaper00059987:Wounding_downregulated
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060445:ikb-1(nr2027)_upregulated_L4
      WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_upregulated_L4
      WBPaper00060445:nfki-1(cer1)_upregulated_L4
      WBPaper00060661:sensory-neuron_depleted
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060909:atfs-1(cmh15)_upregulated
      WBPaper00061007:HB101_downregulated
      WBPaper00061007:S.aquatilis_downregulated
      WBPaper00061203:sin-3(tm1276)_downregulated
      WBPaper00061203:spr-1(ok2144)_downregulated
      WBPaper00061340:Germline
      WBPaper00061527:C41G7.3_2766-ani-2_2946
      WBPaper00061527:T22D1.5-inx-14
      WBPaper00062123:DEPS-1_interacting
      WBPaper00062123:GLH-1_interacting
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062590:Aging_downregulated_body-wall-muscle
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064107:lin-35(n745)_downregulated
      WBPaper00064163:ZNFX-1_interacting_young-adult
      WBPaper00064403:Heat-killed-E.Coli_upregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00064871:hypoxia_upregulated_F1
      WBPaper00065096:25C_vs_20C_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065984:pals-17(syb3980)_upregulated
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4386_cluster_3_1
      cgc4489_group_2
      WBPaper00025032:cluster_1
      WBPaper00025032:cluster_6
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00029437:dcr-1_downregulated
      WBPaper00035227:heat_shock_regulated
      WBPaper00035873:dpy-9_regulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036130:mir-243_down_regulated
      WBPaper00036286:Pattern_B
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040858:eQTL_regulated_old
      WBPaper00040963:TA300_down
      WBPaper00041002:HF_3d_2.0mM_Down
      WBPaper00041002:HF_11d_2.0mM_Up
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_3h
      WBPaper00041939:control_vs_UVC-exposed_3h
      WBPaper00042258:DA1877_downregulated_GravidAdult
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00045263:nuo-6(qm200)_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:cluster_1
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MD_pd(53_min)
      [cgc5767]:expression_class_SM
      [cgc5767]:expression_class_SMD
      [cgc6390]:Cluster_E
      [cgc6390]:intrinsic
    Interaction: WBInteraction000178227
      WBInteraction000204671
      WBInteraction000205690
      WBInteraction000207936
      WBInteraction000210560
      WBInteraction000213455
      WBInteraction000214063
      WBInteraction000214440
      WBInteraction000217423
      WBInteraction000224251
      WBInteraction000231682
      WBInteraction000233864
      WBInteraction000235640
      WBInteraction000236401
      WBInteraction000237385
      WBInteraction000237823
      WBInteraction000239414
      WBInteraction000242557
      WBInteraction000244453
      WBInteraction000250684
      WBInteraction000253099
      WBInteraction000253702
      WBInteraction000255347
      WBInteraction000255820
      WBInteraction000263705
      WBInteraction000268632
      WBInteraction000270075
      WBInteraction000279454
      WBInteraction000282890
      WBInteraction000285328
      WBInteraction000285458
      WBInteraction000286196
      WBInteraction000288839
      WBInteraction000290441
      WBInteraction000292097
      WBInteraction000292785
      WBInteraction000293915
      WBInteraction000298279
      WBInteraction000300200
      WBInteraction000302303
      WBInteraction000303769
      WBInteraction000307442
      WBInteraction000308488
      WBInteraction000308832
      WBInteraction000314995
      WBInteraction000315319
      WBInteraction000318249
      WBInteraction000323132
      WBInteraction000324434
      WBInteraction000325256
      WBInteraction000325773
      WBInteraction000327488
      WBInteraction000331875
      WBInteraction000332478
      WBInteraction000332532
      WBInteraction000332763
      WBInteraction000334452
      WBInteraction000334812
      WBInteraction000340530
      WBInteraction000342221
      WBInteraction000343158
      WBInteraction000343913
      WBInteraction000344750
      WBInteraction000346734
      WBInteraction000347568
      WBInteraction000353709
      WBInteraction000355332
      WBInteraction000356778
      WBInteraction000358759
      WBInteraction000361870
      WBInteraction000362862
      WBInteraction000363978
      WBInteraction000365268
      WBInteraction000366305
      WBInteraction000370156
      WBInteraction000372472
      WBInteraction000373083
      WBInteraction000378070
      WBInteraction000380505
      WBInteraction000380843
      WBInteraction000380847
      WBInteraction000382411
      WBInteraction000387139
      WBInteraction000389100
      WBInteraction000389104
      WBInteraction000389382
      WBInteraction000390501
      WBInteraction000390849
      WBInteraction000391447
      WBInteraction000391665
      WBInteraction000396668
      WBInteraction000397280
      WBInteraction000400463
      WBInteraction000405281
      WBInteraction000408247
      WBInteraction000410580
      WBInteraction000411710
      WBInteraction000415035
      WBInteraction000417819
      WBInteraction000417890
      WBInteraction000418322
      WBInteraction000420930
      WBInteraction000423510
      WBInteraction000424178
      WBInteraction000425274
      WBInteraction000425473
      WBInteraction000425931
      WBInteraction000426131
      WBInteraction000434082
      WBInteraction000436517
      WBInteraction000438769
      WBInteraction000440742
      WBInteraction000442209
      WBInteraction000444740
      WBInteraction000450192
      WBInteraction000451991
      WBInteraction000452348
      WBInteraction000452494
      WBInteraction000455821
      WBInteraction000457754
      WBInteraction000459028
      WBInteraction000462291
      WBInteraction000548327
      WBInteraction000570385
      WBInteraction000576560
      WBInteraction000576992
      WBInteraction000577122
      WBInteraction000578226
      WBInteraction000578227
      WBInteraction000578228
      WBInteraction000578230
      WBInteraction000578233
      WBInteraction000578238
      WBInteraction000579092
      WBInteraction000579337
  Map_info: Map: V Position: 5.57483
    Positive: Positive_clone: F58G11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00061596
    WBPaper00062797
    WBPaper00063233
    WBPaper00064472
    WBPaper00066038
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene