WormBase Tree Display for Gene: WBGene00008005

WBGene00008005 SMap: S_parent: Sequence: C38D4
  Identity: Version: 3
    Name: CGC_name: mip-1 Person_evidence: WBPerson2360
            WBPerson1815
      Sequence_name: C38D4.4
      Molecular_name: C38D4.4
        C38D4.4.1
        CE00917
      Other_name: eggd-1 Person_evidence: WBPerson33205
        CELE_C38D4.4 Accession_evidence: NDB BX284603
      Public_name: mip-1
    DB_info: Database: AceView gene 3F883
        WormQTL gene WBGene00008005
        WormFlux gene WBGene00008005
        NDB locus_tag CELE_C38D4.4
        NCBI gene 175635
        RefSeq protein NM_065587.7
        TrEMBL UniProtAcc Q18509
        UniProt_GCRP UniProtAcc Q18509
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 08 Jul 2021 09:43:16 WBPerson1983 Name_change: CGC_name: mip-1
        3 09 Dec 2021 11:50:30 WBPerson1983 Name_change: Other_name: eggd-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mip
    Allele (33)
    Strain: WBStrain00032612
      WBStrain00049037
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP3220
    Ortholog (14)
    Paralog: WBGene00010281 Caenorhabditis elegans From_analysis: Inparanoid_8
            WormBase-Compara
    Structured_description: Automated_description: Expressed in several structures, including Psub3; Psub4; Z2; Z3; and spermatocyte. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C38D4.4
    Corresponding_transcript: C38D4.4.1
    Other_sequence: CR06004
      CRC06615_1
    Associated_feature: WBsf658867
      WBsf658868
      WBsf992215
      WBsf992216
      WBsf224800
  Experimental_info: RNAi_result: WBRNAi00007954 Inferred_automatically: RNAi_primary
      WBRNAi00042158 Inferred_automatically: RNAi_primary
      WBRNAi00029662 Inferred_automatically: RNAi_primary
      WBRNAi00005026 Inferred_automatically: RNAi_primary
      WBRNAi00011754 Inferred_automatically: RNAi_primary
      WBRNAi00085105 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr15823
      Expr15825
      Expr15827
      Expr15829
      Expr1022049
      Expr1033482
      Expr1146156
      Expr2001514
      Expr2019736
    Drives_construct: WBCnstr00033314
    Construct_product: WBCnstr00033314
    Regulate_expr_cluster: WBPaper00066038:mip-1(how5)_downregulated
      WBPaper00066038:mip-1(how5)_upregulated
    Microarray_results (20)
    Expression_cluster (152)
    Interaction (292)
  Map_info: Map: III Position: -2.53715
    Positive: Positive_clone: C38D4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00061596
    WBPaper00062797
    WBPaper00063233
    WBPaper00064472
    WBPaper00065946
    WBPaper00066038
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene