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WormBase Tree Display for Gene: WBGene00007421

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Name Class

WBGene00007421SMapS_parentSequenceC07H4
IdentityVersion1
NameSequence_nameC07H4.1
Molecular_nameC07H4.1a
C07H4.1a.1
CE02986
C07H4.1b
CE50024
C07H4.1b.1
Other_nameCELE_C07H4.1Accession_evidenceNDBBX284602
Public_nameC07H4.1
DB_infoDatabaseAceViewgene2J380
WormQTLgeneWBGene00007421
WormFluxgeneWBGene00007421
NDBlocus_tagCELE_C07H4.1
NCBIgene174448
RefSeqproteinNM_063538.3
NM_001306568.3
TrEMBLUniProtAccA0A078BS54
Q17803
UniProt_GCRPUniProtAccA0A078BS54
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (34)
RNASeq_FPKM (74)
GO_annotation00000523
Ortholog (23)
ParalogWBGene00020260Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC07H4.1a
C07H4.1b
Corresponding_transcriptC07H4.1a.1
C07H4.1b.1
Other_sequenceEX910671.1
Hbac_isotig04415
CBC10113_1
ES414339.1
HBC08220_1
EX915458.1
FG619522.1
Associated_featureWBsf665898
WBsf988935
WBsf988936
WBsf1012802
WBsf223602
Experimental_infoRNAi_resultWBRNAi00010410Inferred_automaticallyRNAi_primary
WBRNAi00028649Inferred_automaticallyRNAi_primary
WBRNAi00040036Inferred_automaticallyRNAi_primary
Expr_patternExpr1024314
Expr1144106
Expr2000585
Expr2018811
Drives_constructWBCnstr00033750
Construct_productWBCnstr00033750
Microarray_results (16)
Expression_clusterWBPaper00031040:Cluster_5
WBPaper00033065:clk-1(qm30)_upregulated
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:dopaminergic-neurons_larva_enriched
WBPaper00037950:dopaminergic-neurons_larva_SelectivelyEnriched
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00040560:hpl-2_embryo_upregulated
WBPaper00044426:rotenone_5day_downregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045417:128Q-huntingtin_upreglated
WBPaper00045521:Spermatogenic
WBPaper00046509:htz-1(ok3099)_upregulated
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00046858:elt-2(RNAi)_upregulated
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00048988:neuron_expressed
WBPaper00049635:dop-1(vs100)_upregulated
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050053:muscle_enriched_Day4
WBPaper00050468:hlh-30-dependent_Cry5B_regulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:intestine_enriched
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00051404:alg-2(ok304)_downregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(ot267)_downregulated
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00053771:up_at_3h-NaCl
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00056161:male_enriched_siRNA
WBPaper00056167:Cry5B_downregulated
WBPaper00056169:rrf-3(pk1426)_downregulated_L2
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056826:hmc_biased
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00059027:neuron-synapses_enriched
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060634:fhod-1(tm2363)_downregulated
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061274:hypergravity_15xg_downregulated
WBPaper00061340:AIN_parent
WBPaper00061340:ant_arc_V
WBPaper00061340:Neuroblast_HSN_PHB
WBPaper00061340:Posterior_arcade_cell
WBPaper00061341:28C_24h_upregulated
WBPaper00061527:F54D5.3_7003-F54D5.3_7004
WBPaper00061823:mex-3(spr9)_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062587:lsl-1(ljm1)_upregulated
WBPaper00062587:lsl-1(tm4769)_upregulated
WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064716:paraquat_downregulated
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_downregulated_Ref
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065841:38_0
WBPaper00065841:98_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00066232:ash-2(RNAi)_downregulated_WT
cgc4489_group_17
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026980:intestine_enriched
WBPaper00029437:dcr-1_upregulated
WBPaper00031252:AIN-2_IP_enriched
WBPaper00032062:age_regulated_genes
WBPaper00032948:StarveUp1
WBPaper00033099:organophosphorus_pesticide_regulated
WBPaper00034757:up_by_oxidative_stress
WBPaper00035084:L2_enriched_AIN-2_IP
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00035084:L4_enriched_AIN-2_IP
WBPaper00035873:dpy-10_regulated
WBPaper00035873:osmotically_regulated
WBPaper00036123:Atrazine_regulated
WBPaper00036286:Pattern_D
WBPaper00037695:LD_3-day
WBPaper00037695:WC_5-day
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00038231:Cry5B_2-fold_upregulated
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040985:AIN-2_L4_intestine
WBPaper00041002:HQ_3d_0.2mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00042258:DA1877_upregulated_GravidAdult
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00055899:nitroguanidine_regulated
InteractionWBInteraction000147701
WBInteraction000214300
WBInteraction000223988
WBInteraction000228237
WBInteraction000237156
WBInteraction000240314
WBInteraction000243050
WBInteraction000307307
WBInteraction000319756
WBInteraction000329910
WBInteraction000348243
WBInteraction000350884
WBInteraction000369507
WBInteraction000369673
WBInteraction000371073
WBInteraction000371595
WBInteraction000373230
WBInteraction000382312
WBInteraction000390413
WBInteraction000400150
WBInteraction000406110
WBInteraction000410761
WBInteraction000414530
WBInteraction000417922
WBInteraction000424920
WBInteraction000435564
WBInteraction000438907
WBInteraction000452893
WBInteraction000457238
WBInteraction000462429
Map_infoPositivePositive_cloneC07H4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII1.00867
ReferenceWBPaper00033099
MethodGene