WormBase Tree Display for Gene: WBGene00001481

WBGene00001481 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: Y54E10A
  Identity: Version: 1
    Name: CGC_name: fog-1 Person_evidence: WBPerson261
      Sequence_name: Y54E10A.4
      Molecular_name (13)
      Other_name: cpb-4
        CELE_Y54E10A.4 Accession_evidence: NDB BX284601
      Public_name: fog-1
    DB_info: Database: AceView gene 1D785
        WormQTL gene WBGene00001481
        WormFlux gene WBGene00001481
        NDB locus_tag CELE_Y54E10A.4
        Panther gene CAEEL|WormBase=WBGene00001481|UniProtKB=G5EBS6
          family PTHR12566
        NCBI gene 171895
        RefSeq protein NM_001313541.3
            NM_001313540.3
            NM_001381585.1
            NM_001381586.3
        TREEFAM TREEFAM_ID TF317658
        TrEMBL UniProtAcc A0A0K3ATT1
            G5EBS6
            Q95XX9
            A0A0K3AQU4
        UniProt_GCRP UniProtAcc G5EBS6
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:24 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info (12)
  Molecular_info: Corresponding_CDS: Y54E10A.4a
      Y54E10A.4b
      Y54E10A.4c
      Y54E10A.4d
    Corresponding_transcript: Y54E10A.4a.1
      Y54E10A.4a.2
      Y54E10A.4b.1
      Y54E10A.4c.1
      Y54E10A.4d.1
    Other_sequence: CRC04533_1
      MH07524
    Associated_feature: WBsf028075
      WBsf643133
      WBsf656105
      WBsf656106
      WBsf217376
      WBsf217377
  Experimental_info: RNAi_result (15)
    Expr_pattern (11)
    Construct_product: WBCnstr00022307
    Regulate_expr_cluster: WBPaper00048762:FOG-1_associated
    Antibody: WBAntibody00000874
      WBAntibody00000966
    Microarray_results (27)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:germline-precursors_embryo_enriched
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038168:lin-15B(n744)_upregulated
      WBPaper00040209:B.thuringiensis_upregulated_MY18
      WBPaper00040990:PA14_downregulated
      WBPaper00041071:spe-44_upregulated
      WBPaper00042194:nhr-114(RNAi)_upregulated
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045017:blmp-1(tm548)_upregulated
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00045521:Spermatogenic
      WBPaper00045729:gld-2(RNAi)_downregulated
      WBPaper00048762:FOG-1_associated
      WBPaper00048762:FOG-3_associated
      WBPaper00048926:miaserin_upregulated_adult-day10
      WBPaper00048988:neuron_expressed
      WBPaper00049736:daf-2(e1370)_downregulated_15deg-then-25deg(12hr)
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050522:mafr-1(tm6082)_downregulated
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051265:F4_hrde-1(tm1200)_upregulated
      WBPaper00051404:alg-1(gk214)_upregulated
      WBPaper00051404:alg-2(ok304)_upregulated
      WBPaper00051558:aging_regulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053295:lin-22(icb38)_downregulated
      WBPaper00053302:alovudine_24h_regulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
      WBPaper00053318:Aging_upregulated_mRNA_N2
      WBPaper00053318:mir-71(n4115)_upregulated_mRNA
      WBPaper00053321:PGCs_enriched_NuGen
      WBPaper00053388:dauer_regulated_Cluster2
      WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00054758:alg-1(gk204)_downregulated
      WBPaper00054792:FOG-3_interacting
      WBPaper00055103:thoc-5(wy822)_downregulated
      WBPaper00055354:Rapamycin-Allantoin_upregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055386:daf-2(e1370)_downregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00055804:FBF-1-FBF-2-associated_spermatogenic-enriched
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056034:pals-22(jy3)_downregulated
      WBPaper00056039:ptrn-1(tm5597)_upregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056139:soil-microbiota_downregulated
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056165:MINA-1_interacting_mRNA
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056809:smn-1(ok355)_upregulated
      WBPaper00056826:hmc_biased
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057154:HeatShock_downregulated_mRNA
      WBPaper00057288:iff-1(RNAi)_upregulated_transcript
      WBPaper00058598:mex-1(or286)_downregulated
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00058691:sin-3(tm1276)_upregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059664:srbc-48(ac23)_downregulated
      WBPaper00060445:ikb-1(nr2027)_upregulated_L4
      WBPaper00060445:nfki-1(cer1)_upregulated_L4
      WBPaper00060661:sensory-neuron_depleted
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00060909:atfs-1(cmh15)_upregulated
      WBPaper00061274:microgravity_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061527:mlt-9_22518-F33D4.6_14044
      WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
      WBPaper00061613:human-amyloid-beta_upregulated
      WBPaper00061699:daf-18(ok480)_upregulated
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062440:crh-1(n3315)_upregulated
      WBPaper00062497:xpf-1(tm2842)_downregulated
      WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064315:mrg-1(qa6200)_downregulated_PGCs
      WBPaper00064539:nhr-114(gk849)_upregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065096:25C_vs_20C_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
      WBPaper00065215:microgravity_upregulated_DESeq2
      WBPaper00065258:anchor-cell_depleted
      WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
      WBPaper00065975:P-body_vs_oocyte_enriched
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      WBPaper00065984:pals-17(syb3980)_upregulated
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4386_cluster_5_4
      cgc4489_group_20
      WBPaper00025032:cluster_35
      WBPaper00029437:dcr-1_downregulated
      WBPaper00030985:Enterococcus_faecalis_upregulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00037113:CPF_16C_up-regulated
      WBPaper00037611:GLD-2-associated
      WBPaper00037611:RNP-8-associated
      WBPaper00037695:LD_3-day
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00040210:Chlorpyrifos_16C_regulated
      WBPaper00040210:Diazinon_24C_regulated
      WBPaper00040858:eQTL_regulated_aging
      WBPaper00041002:HF_3d_2.0mM_Down
      WBPaper00041002:HF_11d_2.0mM_Up
      WBPaper00041002:HQ_3d_2.0mM_Down
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00042258:DA1877_downregulated_GravidAdult
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00048989:N2_allantoin_upregulated
      WBPaper00048989:N2_rapamycin_upregulated
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MD_pd(23_min)
      [cgc5767]:expression_class_SM
      [cgc5767]:expression_class_SMD
    Interaction: WBInteraction000000009
      WBInteraction000000151
      WBInteraction000000448
      WBInteraction000001305
      WBInteraction000002616
      WBInteraction000003958
      WBInteraction000028403
      WBInteraction000028404
      WBInteraction000029274
      WBInteraction000029768
      WBInteraction000030552
      WBInteraction000052700
      WBInteraction000126891
      WBInteraction000126945
      WBInteraction000127176
      WBInteraction000139439
      WBInteraction000145320
      WBInteraction000145321
      WBInteraction000160380
      WBInteraction000160384
      WBInteraction000166112
      WBInteraction000166260
      WBInteraction000166353
      WBInteraction000187353
      WBInteraction000215125
      WBInteraction000252467
      WBInteraction000252468
      WBInteraction000300488
      WBInteraction000319460
      WBInteraction000424371
      WBInteraction000502808
      WBInteraction000502809
      WBInteraction000502810
      WBInteraction000502811
      WBInteraction000502812
      WBInteraction000502813
      WBInteraction000517229
      WBInteraction000517846
      WBInteraction000517854
      WBInteraction000517862
      WBInteraction000517871
      WBInteraction000518569
      WBInteraction000518591
      WBInteraction000524766
      WBInteraction000524773
      WBInteraction000524789
      WBInteraction000541026
      WBInteraction000550436
      WBInteraction000550438
      WBInteraction000550439
      WBInteraction000550440
      WBInteraction000550448
      WBInteraction000550456
      WBInteraction000550466
      WBInteraction000550467
      WBInteraction000550469
      WBInteraction000550470
      WBInteraction000550480
      WBInteraction000550497
      WBInteraction000550504
      WBInteraction000550520
      WBInteraction000550570
      WBInteraction000550572
      WBInteraction000550574
      WBInteraction000550575
      WBInteraction000550576
      WBInteraction000550582
      WBInteraction000550610
      WBInteraction000550624
      WBInteraction000550633
      WBInteraction000550663
      WBInteraction000555220
      WBInteraction000576795
  Map_info: Map: I Position: -4.47297 Error: 0.001409
    Well_ordered
    Positive: Positive_clone: Y54E10A Inferred_automatically: From sequence, transcript, pseudogene data
    Negative: Outside_rearr: sDf4
    Mapping_data: 2_point: 2502
      Multi_point (19)
      Pos_neg_data (9)
  Reference (141)
  Picture: WBPicture0000013095
  Method: Gene