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WormBase Tree Display for Gene: WBGene00000887

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Name Class

WBGene00000887SMapS_parentSequenceT01B7
IdentityVersion2
NameCGC_namecyn-11Person_evidenceWBPerson466
Sequence_nameT01B7.4
Molecular_nameT01B7.4
T01B7.4.1
CE03588
Other_namecyp-11Person_evidenceWBPerson466
CELE_T01B7.4Accession_evidenceNDBBX284602
Public_namecyn-11
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:21WBPerson1971EventImportedInitial conversion from geneace
220 Sep 2004 16:20:03WBPerson1971Name_changeCGC_namecyp-11 -> cyn-11
StatusLive
Gene_info (11)
Molecular_infoCorresponding_CDST01B7.4
Corresponding_transcriptT01B7.4.1
Other_sequence (43)
Associated_featureWBsf665257
WBsf665846
WBsf665847
WBsf223540
Experimental_infoRNAi_resultWBRNAi00103495Inferred_automaticallyRNAi_primary
WBRNAi00062346Inferred_automaticallyRNAi_primary
WBRNAi00017940Inferred_automaticallyRNAi_primary
WBRNAi00080136Inferred_automaticallyRNAi_primary
WBRNAi00027812Inferred_automaticallyRNAi_primary
WBRNAi00112131Inferred_automaticallyRNAi_primary
WBRNAi00062347Inferred_automaticallyRNAi_primary
WBRNAi00052082Inferred_automaticallyRNAi_primary
WBRNAi00080048Inferred_automaticallyRNAi_primary
WBRNAi00076625Inferred_automaticallyRNAi_primary
Expr_patternExpr1020148
Expr1030552
Expr1155714
Expr2010663
Expr2028903
Drives_constructWBCnstr00037219
Construct_productWBCnstr00037219
Microarray_results (18)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:dopaminergic-neurons_larva_enriched
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:germline-precursors_embryo_enriched
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_larva_enriched
WBPaper00040560:hpl-2_embryo_downregulated
WBPaper00043951:insoluble_protein_day16_N2
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(gk119)_downregulated
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_downregulated
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00050225:flp-6(RNAi)_downregulated
WBPaper00050344:AFD-neuron_enriched
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:body-muscle_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:germline_enriched
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster6
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055648:germline_expressed
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056997:nmad-1(ok3133)_downregulated_germline_25C
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060661:sensory-neuron_depleted
WBPaper00061007:HB101_downregulated
WBPaper00061007:S.aquatilis_downregulated
WBPaper00061045:Y56A3A.22(cck200)_downregulated
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061341:28C_24h_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061479:HDA-1_interacting_protein
WBPaper00061527:pch-2-B0393.3
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062498:PPM-1.D_interacting
WBPaper00064071:NHR-49_interacting
WBPaper00064494:postdauer_downregulated_AWA
WBPaper00064716:paraquat_upregulated
WBPaper00064789:Day9_vs_Day1_upregulated_neuron
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_2
WBPaper00025141:unc-4::GFP_Enriched_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030839:Embryo_A_Class
WBPaper00030839:Embryo_Pan_Neuronal
WBPaper00032948:FedUp
WBPaper00035084:L2_enriched_AIN-2_IP
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00035892:Y.pestis_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00036123:Atrazine_regulated
WBPaper00036286:Pattern_F
WBPaper00037901:GLD-1_mRNA_targets
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(186_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
[cgc6390]:oogenesis-enriched
InteractionWBInteraction000165098
WBInteraction000174239
WBInteraction000228204
WBInteraction000236429
WBInteraction000244848
WBInteraction000254271
WBInteraction000258918
WBInteraction000259136
WBInteraction000260235
WBInteraction000289999
WBInteraction000313246
WBInteraction000315277
WBInteraction000318354
WBInteraction000322079
WBInteraction000324296
WBInteraction000379090
WBInteraction000379837
WBInteraction000381379
WBInteraction000399098
WBInteraction000403680
WBInteraction000418264
WBInteraction000431623
WBInteraction000455865
WBInteraction000542080
WBInteraction000542139
WBInteraction000542539
WBInteraction000569773
WBInteraction000574997
WBInteraction000579933
Map_infoMapIIPosition0.86311Error0.001543
PositivePositive_cloneC34C6
T01B7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00002472
WBPaper00018599
WBPaper00026884
WBPaper00038491
WBPaper00055090
WBPaper00061547
WBPaper00065275
RemarkCyclophilin family (diverged CsA-binding domain).
[Page AM] Identified by the sequencing project. Has cyclophilin homology by Blast analysis. cDNA clone isolated.
PPIase or cyclophilin, EC 5.2.1.8
This gene has been renamed with approval of the CGC (cyp-11->cyn-11)Person_evidenceWBPerson466
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene