WormBase Tree Display for Gene: WBGene00008820

WBGene00008820 SMap: S_parent: Sequence: F14F11
  Identity: Version: 2
    Name: CGC_name: nlp-55 Person_evidence: WBPerson3480
      Sequence_name: F14F11.2
      Molecular_name: F14F11.2
        F14F11.2.1
        CE03210
      Other_name: CELE_F14F11.2 Accession_evidence: NDB BX284602
      Public_name: nlp-55
    DB_info: Database: AceView gene 2I584
        WormQTL gene WBGene00008820
        WormFlux gene WBGene00008820
        NDB locus_tag CELE_F14F11.2
        NCBI gene 184487
        RefSeq protein NM_063350.4
        TrEMBL UniProtAcc Q19465
        UniProt_GCRP UniProtAcc Q19465
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 26 Oct 2016 16:39:57 WBPerson2970 Name_change: CGC_name: nlp-55
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nlp
    Allele (15)
    RNASeq_FPKM (74)
    GO_annotation: 00064805
    Ortholog: WBGene00024040 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00053880 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00155620 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00122489 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      CBOVI.g6394 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g16212 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g10705 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g17004 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g21827 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g16833 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2016 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g16910 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9645 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g3992 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-F14F11.2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g21405 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      FL83_08691 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_004992 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_20137200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g5213 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in neuropeptide signaling pathway. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F14F11.2
    Corresponding_transcript: F14F11.2.1
    Other_sequence (12)
    Associated_feature: WBsf650306
      WBsf223476
      WBsf223477
      WBsf223478
  Experimental_info: RNAi_result: WBRNAi00030950 Inferred_automatically: RNAi_primary
      WBRNAi00013289 Inferred_automatically: RNAi_primary
      WBRNAi00044614 Inferred_automatically: RNAi_primary
      WBRNAi00025108 Inferred_automatically: RNAi_primary
      WBRNAi00027282 Inferred_automatically: RNAi_primary
      WBRNAi00025109 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012040
      Expr1033845
      Expr1148580
      Expr2014319
      Expr2032560
    Drives_construct: WBCnstr00032659
    Construct_product: WBCnstr00032659
    Microarray_results (18)
    Expression_cluster: WBPaper00024970:GABAergic_neuron_specific
      WBPaper00032425:down_in_alg-1
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_larva_enriched
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:BAG-neuron_embryo_enriched
      WBPaper00037950:BAG-neuron_embryo_SelectivelyEnriched
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:dopaminergic-neurons_larva_enriched
      WBPaper00037950:dopaminergic-neurons_larva_SelectivelyEnriched
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00040560:hpl-2_embryo_upregulated
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044656:tatn-1(qd182)_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
      WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00049018:swsn-2.2(RNAi)_upregulated
      WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_24-cell-embryo
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051558:aging_regulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053388:dauer_regulated_Cluster2
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055103:thoc-5(wy822)_upregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055648:male-CEM-neurons_expressed
      WBPaper00055648:male-tail_expressed
      WBPaper00055971:nhl-2(ok818)_20C_downregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00056826:hmc_biased
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057041:spc-1(cas971)_downregulated
      WBPaper00057041:unc-70(cas983)_downregulated
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059566:wdr-23(mac32)_upregulated
      WBPaper00059728:20ug_cholesterol_upregulated
      WBPaper00060100:SiNP_downregulated_mRNA
      WBPaper00060273:isp-1(qm150)_upregulated
      WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060459:bcat-1(RNAi)_upregulated
      WBPaper00060634:fhod-1(tm2363)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061007:HB101_upregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061007:X.citri_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061340:AIB
      WBPaper00061340:AIM
      WBPaper00061340:AIY
      WBPaper00061340:ASG
      WBPaper00061340:BAG
      WBPaper00061340:CEP
      WBPaper00061340:PVP
      WBPaper00061340:PVT
      WBPaper00061340:RIA
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061405:S.aureus_downregulated_starvation
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061527:flp-5-F17C11.2
      WBPaper00061651:AIM_enriched
      WBPaper00061651:AIY_enriched
      WBPaper00061651:AIZ_enriched
      WBPaper00061651:ALM_enriched
      WBPaper00061651:ASG_enriched
      WBPaper00061651:ASK_enriched
      WBPaper00061651:AVM_enriched
      WBPaper00061651:BAG_enriched
      WBPaper00061651:BDU_enriched
      WBPaper00061651:CEP_enriched
      WBPaper00061651:DVA_enriched
      WBPaper00061651:DVC_enriched
      WBPaper00061651:HSN_enriched
      WBPaper00061651:PDE_enriched
      WBPaper00061651:PLM_enriched
      WBPaper00061651:PVM_enriched
      WBPaper00061651:PVP_enriched
      WBPaper00061651:PVQ_enriched
      WBPaper00061651:PVR_enriched
      WBPaper00061651:RIF_enriched
      WBPaper00061651:RIG_enriched
      WBPaper00061651:URB_enriched
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00061902:camt-1(ok515)_regulated_AFD
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062095:unc-4(e120)_upregulated_VA-neuron
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062520:qui-1(db104)_upregulated
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00064721:fasn-1(g14)_downregulated_starved
      WBPaper00064769:him-17(me24)_upregulated
      WBPaper00064871:hypoxia_downregulated_F1
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065158:AFD_enriched
      WBPaper00065258:anchor-cell_enriched
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065623:81
      WBPaper00065623:90
      WBPaper00065623:116
      WBPaper00065623:147
      WBPaper00065623:156
      WBPaper00065623:169
      WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
      WBPaper00065749:Heat-Shock_downregulated_N2
      WBPaper00065841:17_0
      WBPaper00065841:20_0
      WBPaper00065841:20_1
      WBPaper00065841:20_2
      WBPaper00065841:29_0
      WBPaper00065841:36_0
      WBPaper00065841:36_2
      WBPaper00065841:36_3
      WBPaper00065841:50_0
      WBPaper00065841:54_0
      WBPaper00065841:62_0
      WBPaper00065841:63_0
      WBPaper00065841:66_0
      WBPaper00065841:68_1
      WBPaper00065841:80_0
      WBPaper00065841:85_0
      WBPaper00065841:87_0
      WBPaper00065841:92_0
      WBPaper00065841:103_0
      WBPaper00065841:112_0
      WBPaper00065841:114_0
      WBPaper00065841:117_0
      WBPaper00065841:122_0
      WBPaper00065841:130_0
      WBPaper00065841:137_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066110:Doxorubicin_upregulated_diploid
      cgc4386_cluster_2_6
      cgc4489_group_9
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00030985:Photorhabdus_luminescens_upregulated
      WBPaper00030985:Serratia_marcesens_downregulated
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00032062:age_regulated_genes
      WBPaper00032948:StarveUp3
      WBPaper00034739:N2moreDR1350
      WBPaper00035084:embryo_enriched_AIN-2_IP
      WBPaper00035084:L2_enriched_AIN-2_IP
      WBPaper00035084:L3_enriched_AIN-2_IP
      WBPaper00035084:L4_enriched_AIN-2_IP
      WBPaper00035227:heat_shock_regulated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036123:Cadmium_regulated
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00036130:mir-243_up_regulated
      WBPaper00038060:SUMO-1_downregulated
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00038427:lin-54_embryo_changed
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.5
      WBPaper00040821:Au-NP_regulated
      WBPaper00040876:mir-35_downregulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00042258:DA1877_upregulated_GravidAdult
      WBPaper00042274:tbx-2(bx59)_upregulated
      WBPaper00042548:miRISC_enriched
      WBPaper00042574:N2_OrsayVirus_downregulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045673:colistin_upregulated
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00056330:mrps-5(RNAi)_upregulated
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_SM
      [cgc6390]:male_soma-enriched
    Interaction: WBInteraction000028986
      WBInteraction000114386
      WBInteraction000116156
      WBInteraction000133824
      WBInteraction000150317
      WBInteraction000186779
      WBInteraction000188158
      WBInteraction000190823
      WBInteraction000192063
      WBInteraction000196572
      WBInteraction000199759
      WBInteraction000207048
      WBInteraction000210822
      WBInteraction000213062
      WBInteraction000216019
      WBInteraction000224134
      WBInteraction000224892
      WBInteraction000225573
      WBInteraction000226085
      WBInteraction000227406
      WBInteraction000237841
      WBInteraction000243240
      WBInteraction000261134
      WBInteraction000280718
      WBInteraction000282504
      WBInteraction000282517
      WBInteraction000289658
      WBInteraction000298122
      WBInteraction000298294
      WBInteraction000320353
      WBInteraction000320835
      WBInteraction000326415
      WBInteraction000330183
      WBInteraction000342383
      WBInteraction000346729
      WBInteraction000370379
      WBInteraction000376105
      WBInteraction000385928
      WBInteraction000394893
      WBInteraction000421492
      WBInteraction000436421
      WBInteraction000450907
      WBInteraction000451054
      WBInteraction000454806
      WBInteraction000458810
  Map_info: Positive: Positive_clone: F14F11 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 0.759209
  Reference: WBPaper00064634
  Method: Gene