Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00015487

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00015487SMapS_parentSequenceC05D11
IdentityVersion2
NameCGC_namemrps-17Person_evidenceWBPerson261
WBPerson555
Sequence_nameC05D11.10
Molecular_nameC05D11.10
C05D11.10.1
CE01129
Other_nameCELE_C05D11.10Accession_evidenceNDBBX284603
Public_namemrps-17
DB_infoDatabaseAceViewgene3H520
WormQTLgeneWBGene00015487
WormFluxgeneWBGene00015487
NDBlocus_tagCELE_C05D11.10
PanthergeneCAEEL|WormBase=WBGene00015487|UniProtKB=Q11189
familyPTHR24088
NCBIgene175912
RefSeqproteinNM_066008.6
SwissProtUniProtAccQ11189
TREEFAMTREEFAM_IDTF326484
UniProt_GCRPUniProtAccQ11189
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
210 Jun 2011 16:50:10WBPerson2970Name_changeCGC_namemrps-17
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmrps
Allele (12)
StrainWBStrain00001398
RNASeq_FPKM (74)
GO_annotation00057481
00057482
00057483
00057484
00057485
00057486
00057487
00057488
00057489
00121388
00121389
Contained_in_operonCEOP3372
Ortholog (32)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Is an ortholog of human MRPS17 (mitochondrial ribosomal protein S17).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC05D11.10
Corresponding_transcriptC05D11.10.1
Other_sequence (23)
Associated_featureWBsf651127
WBsf666993
WBsf666994
WBsf226822
Experimental_infoRNAi_result (14)
Expr_patternChronogram1574
Expr5166
Expr1016115
Expr1036625
Expr1143822
Expr2013739
Expr2031974
Drives_constructWBCnstr00002288
WBCnstr00028808
Construct_productWBCnstr00028808
Microarray_results (18)
Expression_clusterWBPaper00029359_1197
WBPaper00029359_1225
WBPaper00029359_1291
WBPaper00029359_1367
WBPaper00029359_1483
WBPaper00029359_1494
WBPaper00029359_1546
WBPaper00029359_1561
WBPaper00029359_1692
WBPaper00031040:TGF-beta_adult_downregulated
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044736:flat_dev_expression
WBPaper00045316:prg-1_downregulated_L2
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_downregulated
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046509:htz-1(ok3099)_downregulated
WBPaper00047132:skn-1(RNAi)_downregulated_glp-1(ts)-dependent
WBPaper00048910:mRNA-interacting_protein
WBPaper00048988:neuron_expressed
WBPaper00049498:npr-1(ur89)_regulated_6
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:germline_enriched
WBPaper00051558:fog-2(q71)_regulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053289:DREAM-target
WBPaper00053321:embryo-to-L1_upregulated_WT_SMARTseq
WBPaper00053388:dauer_regulated_Cluster6
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00053810:daf-2(e1370)_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00055060:flr-1(RNAi)_downregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055482:pmt-2(RNAi)_downregulated
WBPaper00055648:germline_expressed
WBPaper00055827:pfd-6(gk493446)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056617:adr-1(gv6)_downregulated_L4_protein
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058958:100mGy-irradiation-72h_downregulated
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059356:set-6(ok2195)_baz-2(tm0235)_regulated
WBPaper00059471:EGL-43_interacting
WBPaper00060014:set-2(zr2012)_upregulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060661:sensory-neuron_depleted
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061274:hypergravity_15xg_downregulated
WBPaper00061341:28C_24h_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061527:mrpl-54-lbp-4
WBPaper00062293:isp-1(qm150)_downregulated
WBPaper00062498:PPM-1.D_interacting
WBPaper00062554:MAGU-2_interacting
WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064716:paraquat_upregulated
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065945:epidermis-rpoa-2(-)_downregulated_protein
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066038:mip-1(how5)_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4386_cluster_4_5
cgc4489_group_7
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030985:Erwinia_carotovora_downregulated
WBPaper00036286:Pattern_E
WBPaper00037695:WC_5-day
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00038231:Cry5B_2-fold_downregulated
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00048637:lin-35(n745)_starvation_downregulated
WBPaper00053236:Starvation_regulated_N2
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
Interaction (42)
Map_infoMapIIIPosition-1.28077Error0.000501
PositivePositive_cloneC05D11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00033751
WBPaper00038491
WBPaper00047123
WBPaper00049828
WBPaper00055090
WBPaper00061547
WBPaper00063976
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene