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WormBase Tree Display for Gene: WBGene00015349

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Name Class

WBGene00015349SMapS_parentSequenceC02F5
IdentityVersion2
NameCGC_namehenn-1Paper_evidenceWBPaper00041023
WBPaper00041020
Person_evidenceWBPerson1159
Sequence_nameC02F5.6
Molecular_nameC02F5.6b
C02F5.6a
CE51509
C02F5.6b.1
Other_nameCELE_C02F5.6Accession_evidenceNDBBX284603
Public_namehenn-1
DB_infoDatabaseAceViewgene3J321
WormQTLgeneWBGene00015349
WormFluxgeneWBGene00015349
NDBlocus_tagCELE_C02F5.6
PanthergeneCAEEL|WormBase=WBGene00015349|UniProtKB=P34283
familyPTHR21404
NCBIgene176159
RefSeqproteinNR_136348.1
NM_001322688.3
KEGGKEGG_id2.1.1.386
NemaPathKEGG_id2.1.1.386
SwissProtUniProtAccP34283
TREEFAMTREEFAM_IDTF315178
UniProt_GCRPUniProtAccP34283
RNAcentralURSidURS0000A118F6
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:55WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
211 May 2012 16:05:19WBPerson2970Name_changeCGC_namehenn-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhenn
Allele (24)
StrainWBStrain00026603
WBStrain00026613
WBStrain00026606
WBStrain00026604
WBStrain00026614
WBStrain00026611
WBStrain00026605
WBStrain00026601
RNASeq_FPKM (74)
GO_annotation (35)
Contained_in_operonCEOP3488
Ortholog (25)
Structured_descriptionAutomated_descriptionEnables small RNA 2'-O-methyltransferase activity. Involved in RNA methylation; piRNA processing; and siRNA processing. Located in nucleoplasm and perinuclear region of cytoplasm. Expressed in germ line and somatic cell. Is an ortholog of human HENMT1 (HEN methyltransferase 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC02F5.6b
Corresponding_CDS_historyC02F5.6a:wp252
C02F5.6b:wp252
Corresponding_transcriptC02F5.6a
C02F5.6b.1
Other_sequenceDviv_isotig16619
TM01003
CBC12816_1
Tcol_isotig15445
TMC00300_1
Associated_featureWBsf645398
Experimental_infoRNAi_resultWBRNAi00039457Inferred_automaticallyRNAi_primary
WBRNAi00005875Inferred_automaticallyRNAi_primary
WBRNAi00039456Inferred_automaticallyRNAi_primary
WBRNAi00028360Inferred_automaticallyRNAi_primary
Expr_patternExpr10044
Expr10533
Expr1018239
Expr1036575
Expr1143566
Expr2012398
Expr2030634
Drives_constructWBCnstr00015520
WBCnstr00028912
Construct_productWBCnstr00014579
WBCnstr00014580
WBCnstr00015520
WBCnstr00028912
Regulate_expr_clusterWBPaper00058942:henn-1(pk2295)_downregulated
WBPaper00058942:henn-1(pk2295)_upregulated
AntibodyWBAntibody00002334
WBAntibody00002377
Microarray_results (30)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032031:DConiospora_upregulated_cDNA_24h
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00033065:isp-1-1(qm150)_upregulated
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:rising_dev_expression
WBPaper00044760:germline_specific
WBPaper00045257:bar-1(ga80)_downregulated
WBPaper00045521:Gender_Neutral
WBPaper00045693:S.flexneri_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00045974:NSM_enriched_DSN-treated_RNAseq
WBPaper00045974:NSM_enriched_totalRNA_RNAseq
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049217:DAF-16_upregulated
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050015:ifg-1(RNAi)_downregulated
WBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050990:hypodermis_enriched
WBPaper00050990:hypodermis_expressed
WBPaper00051039:germline_enriched
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053814:25C_downregulated_PY79
WBPaper00055565:AVK_enriched
WBPaper00055648:germline_expressed
WBPaper00056826:SGP_biased
WBPaper00057136:yap-1(ys38)_upregulated
WBPaper00057288:Cold_downregulated_transcript
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058942:henn-1(pk2295)_downregulated
WBPaper00058969:RIS_enriched
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061203:spr-1(ok2144)_downregulated
WBPaper00061340:rect_D
WBPaper00061478:SUMO-conjugated_protein
WBPaper00061527:ima-1_20458-bath-41
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064716:paraquat_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_9
WBPaper00025032:cluster_29
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00038427:lin-54_embryo_changed
WBPaper00040426:CYD-1_CDK-4_upregulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040858:eQTL_regulated_old
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:cluster_18
[cgc5767]:expression_class_E
[cgc5767]:expression_class_ET
[cgc5767]:expression_class_ET_max(66_min)
[cgc5767]:expression_class_E_pi(53_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
[cgc5767]:expression_class_MET
[cgc6390]:Cluster_E
[cgc6390]:intrinsic
InteractionWBInteraction000518834
WBInteraction000563929
WBInteraction000573806
WBInteraction000574378
Map_infoMapIIIPosition-0.356135
PositivePositive_cloneC02F5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (14)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene