WormBase Tree Display for Gene: WBGene00009045

WBGene00009045 SMap: S_parent: Sequence: F22B5
  Identity: Version: 1
    Name: Sequence_name: F22B5.10
      Molecular_name: F22B5.10
        F22B5.10.1
        CE02196
      Other_name: CELE_F22B5.10 Accession_evidence: NDB BX284602
      Public_name: F22B5.10
    DB_info: Database: AceView gene 2I757
        WormQTL gene WBGene00009045
        WormFlux gene WBGene00009045
        NDB locus_tag CELE_F22B5.10
        Panther gene CAEEL|WormBase=WBGene00009045|UniProtKB=Q19714
          family PTHR20917
        NCBI gene 174352
        RefSeq protein NM_063385.8
        SwissProt UniProtAcc Q19714
        TREEFAM TREEFAM_ID TF315045
        UniProt_GCRP UniProtAcc Q19714
        OMIM gene 614123
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (12)
    Strain: WBStrain00036948
    RNASeq_FPKM (74)
    GO_annotation (18)
    Contained_in_operon: CEOP2348
    Ortholog (33)
    Structured_description: Automated_description: Predicted to enable calcium channel activity. Involved in calcium ion transmembrane transport and endoplasmic reticulum calcium ion homeostasis. Located in striated muscle dense body. Human ortholog(s) of this gene implicated in craniofacial dysmorphism, skeletal anomalies, and impaired intellectual development syndrome 1. Is an ortholog of human TMCO1 (transmembrane and coiled-coil domains 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0081124 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:18188)
  Molecular_info: Corresponding_CDS: F22B5.10
    Corresponding_transcript: F22B5.10.1
    Other_sequence (56)
    Associated_feature: WBsf221748
      WBsf221749
      WBsf221750
  Experimental_info: RNAi_result: WBRNAi00062212 Inferred_automatically: RNAi_primary
      WBRNAi00109652 Inferred_automatically: RNAi_primary
      WBRNAi00109793 Inferred_automatically: RNAi_primary
      WBRNAi00109746 Inferred_automatically: RNAi_primary
      WBRNAi00081144 Inferred_automatically: RNAi_primary
      WBRNAi00013728 Inferred_automatically: RNAi_primary
      WBRNAi00031254 Inferred_automatically: RNAi_primary
      WBRNAi00045276 Inferred_automatically: RNAi_primary
      WBRNAi00109699 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9382
      Expr1015955
      Expr1033943
      Expr1149206
      Expr2002849
      Expr2021067
    Drives_construct: WBCnstr00032500
    Construct_product: WBCnstr00013947
      WBCnstr00032500
    Microarray_results (17)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032528:L3_enriched
      WBPaper00033065:isp-1-1(qm150)_upregulated
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038289:oocyte_protein
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00045774:clk-1_downregulated
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_3
      WBPaper00050053:muscle_enriched_Day4
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051245:body-wall-muscle_cytoplasm_expressed
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051245:pharyngeal-muscle_cytoplasm_expressed
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053615:SMO-1_target
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00053810:nuo-6(qm200)_downregulated
      WBPaper00055482:pmt-2(RNAi)_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00058598:sin-3(tm1276)_upregulated
      WBPaper00060459:bcat-1(RNAi)_downregulated
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061203:sin-3(tm1276)_downregulated
      WBPaper00061274:microgravity_upregulated
      WBPaper00061527:C28H8.4-ZK418.5_10918
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064071:NHR-49_interacting
      WBPaper00064494:postdauer_downregulated_AWA
      WBPaper00064716:paraquat_upregulated
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065993:glp-1(e2141)_downregulated
      cgc4386_cluster_5_3
      cgc4489_group_4
      WBPaper00025032:cluster_40
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036123:Cadmium_regulated
      WBPaper00036286:Pattern_F
      WBPaper00037147:heatshock_upregulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00045960:L1-L4-lethargus_downregulated
      WBPaper00045960:L4-lethargus_downregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_SM
      [cgc6390]:mixed_oogenesis-somatic
    SAGE_tag (17)
    Interaction (41)
  Map_info: Positive: Positive_clone: F22B5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 0.812789
  Reference: WBPaper00034662
    WBPaper00035228
    WBPaper00038444
    WBPaper00038491
    WBPaper00055090
    WBPaper00060275
  Method: Gene