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WormBase Tree Display for Gene: WBGene00004134

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Name Class

WBGene00004134SMapS_parentSequenceCHROMOSOME_II
IdentityVersion2
NameCGC_namemyrf-1Person_evidenceWBPerson7150
Sequence_nameF59B10.1
Molecular_nameF59B10.1
F59B10.1.1
CE36940
Other_namepqn-47Person_evidenceWBPerson625
CELE_F59B10.1Accession_evidenceNDBBX284602
Public_namemyrf-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:34WBPerson1971EventImportedInitial conversion from geneace
209 Dec 2014 15:51:18WBPerson2970Name_changeCGC_namemyrf-1
Other_namepqn-47
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmyrf
Allele (84)
Possibly_affected_byWBVar02157207
StrainWBStrain00037532
WBStrain00037768
RNASeq_FPKM (74)
GO_annotation (32)
OrthologWBGene00053383Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00026022Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00036891Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00148985Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00129757Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00109902Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00223742Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g7662Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g9502Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g9504Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10504Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g16970Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g13341Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g14930Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15570Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g75Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g28635Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g16084Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00033.g1877Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00726.g13726Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_08396.g21479Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_09102.g21882Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-myrf-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g8967Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00141.g5476Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_24052Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005524Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07331Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07333Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g3950Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20286300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5749Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238597Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00267078Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00289738Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0034985Drosophila melanogasterFrom_analysisEnsEMBL-Compara
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-080204-57Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:1181Homo sapiensFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:26316Homo sapiensFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:2684944Mus musculusFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:2685085Mus musculusFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1306622Rattus norvegicusFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1562127Rattus norvegicusFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00008999Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
Structured_descriptionConcise_descriptionmyrf-1 encodes a protein with a glutamine/asparagine-rich domain, orthologous to human MYRF (myelin regulatory factor); in C. elegans, MYRF-1 activity is required for regulation of the molting cycle, specifically the completion of larval molts and cessation of molting in reproductively mature adult animals; a MYRF-1::GFP fusion protein is expressed in a wide variety of cells and tissues, including neurons, secretory cells, and hypodermal seam cells, but is not seen in the hyp7 syncytial hypodermis; expression begins in the comma stage of embryogenesis and persists through adulthood; full length C. elegans MYRF-1::GFP localizes to the cytoplasm where it partially overlaps with the endoplasmic reticulum; MYRF-1 contains a well-conserved paralog in the C. elegans genome, MYRF-2, encoded by F21A10.2.Paper_evidenceWBPaper00004651
WBPaper00005487
WBPaper00005654
WBPaper00012811
WBPaper00040293
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated19 Dec 2014 00:00:00
Automated_descriptionPredicted to enable DNA-binding transcription factor activity and sequence-specific DNA binding activity. Involved in ecdysis, collagen and cuticulin-based cuticle and nematode larval development. Located in basal part of cell and endoplasmic reticulum. Expressed in several structures, including ciliated neurons; excretory duct; gonad; pharyngeal cell; and somatic nervous system. Human ortholog(s) of this gene implicated in cerebral infarction; congenital diaphragmatic hernia; and eye disease (multiple). Is an ortholog of human MYRFL (myelin regulatory factor like).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0080634Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1181)
DOID:3827Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1181)
DOID:9834Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1181)
DOID:1405Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1181)
DOID:3526Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1181)
Molecular_infoCorresponding_CDSF59B10.1
Corresponding_CDS_historyF59B10.1:wp127
Corresponding_transcriptF59B10.1.1
Other_sequenceCR10282
CR10281
CRC03559_1
ACC07624_1
SRC00534_1
EY470006.1
Tcol_isotig21011
SR01712
Name_isotig07910
JI164614.1
Associated_featureWBsf650502
WBsf650503
WBsf666041
WBsf978827
WBsf981265
WBsf989356
WBsf989357
WBsf989358
WBsf1013024
WBsf1013025
WBsf1013026
WBsf223794
WBsf223795
WBsf223796
WBsf223797
Transcription_factorWBTranscriptionFactor000563
Experimental_infoRNAi_result (46)
Expr_pattern (14)
Drives_construct (7)
Construct_productWBCnstr00009460
WBCnstr00014243
WBCnstr00014244
WBCnstr00037934
Regulate_expr_clusterWBPaper00061377:MYRF-1_interacting
Microarray_results (16)
Expression_cluster (185)
Interaction (679)
Anatomy_functionWBbtf1093
WBbtf1094
WBbtf1095
Map_infoMapIIPosition2.9838Error0.041984
PositivePositive_cloneF59B10Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
Reference (14)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene