WormBase Tree Display for Gene: WBGene00019163
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| WBGene00019163 | SMap | S_parent | Sequence | H06H21 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | ubxn-6 | Person_evidence | WBPerson2838 | |||||
| WBPerson4369 | |||||||||
| Sequence_name | H06H21.6 | ||||||||
| Molecular_name | H06H21.6 | ||||||||
| H06H21.6.1 | |||||||||
| CE33662 | |||||||||
| Other_name | CELE_H06H21.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ubxn-6 | ||||||||
| DB_info | Database | AceView | gene | 4F572 | |||||
| WormQTL | gene | WBGene00019163 | |||||||
| WormFlux | gene | WBGene00019163 | |||||||
| NDB | locus_tag | CELE_H06H21.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019163|UniProtKB=Q8WTJ4 | |||||||
| family | PTHR23153 | ||||||||
| NCBI | gene | 177253 | |||||||
| RefSeq | protein | NM_068247.8 | |||||||
| SwissProt | UniProtAcc | Q8WTJ4 | |||||||
| TREEFAM | TREEFAM_ID | TF314617 | |||||||
| UniProt_GCRP | UniProtAcc | Q8WTJ4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 05 Jan 2006 11:22:20 | WBPerson2970 | Name_change | CGC_name | ubxn-6 | ||||
| 3 | 06 Mar 2018 14:47:25 | WBPerson4025 | Event | Split_into | WBGene00302995 | ||||
| Split_into | WBGene00302995 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ubxn | ||||||||
| Allele | WBVar01953777 | ||||||||
| WBVar01953778 | |||||||||
| WBVar00424128 | |||||||||
| WBVar00424129 | |||||||||
| WBVar00424130 | |||||||||
| WBVar00424131 | |||||||||
| WBVar00424132 | |||||||||
| WBVar01492412 | |||||||||
| WBVar01499790 | |||||||||
| WBVar01499242 | |||||||||
| WBVar01499633 | |||||||||
| WBVar00188803 | |||||||||
| WBVar00188804 | |||||||||
| WBVar00907150 | |||||||||
| WBVar00907151 | |||||||||
| WBVar00907152 | |||||||||
| WBVar00907153 | |||||||||
| WBVar00907154 | |||||||||
| WBVar00907155 | |||||||||
| WBVar00907156 | |||||||||
| WBVar00907157 | |||||||||
| WBVar00907158 | |||||||||
| WBVar00907159 | |||||||||
| WBVar00907160 | |||||||||
| WBVar00907161 | |||||||||
| WBVar00907162 | |||||||||
| WBVar00907163 | |||||||||
| WBVar00907164 | |||||||||
| WBVar00907165 | |||||||||
| WBVar01568985 | |||||||||
| WBVar00907166 | |||||||||
| WBVar00907167 | |||||||||
| WBVar00907168 | |||||||||
| WBVar00907169 | |||||||||
| WBVar00907170 | |||||||||
| WBVar01500245 | |||||||||
| Strain | WBStrain00003521 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (3) | |||||||||
| Contained_in_operon | CEOP4152 | ||||||||
| CEOP5608 | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00007100 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | ubxn-6 encodes one of six C. elegans UBX (ubiquitin regulatory X) domain-containing proteins. | Paper_evidence | WBPaper00029386 | |||||
| WBPaper00037734 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 05 Apr 2011 00:00:00 | ||||||||
| Automated_description | Predicted to be located in cytoplasm. Expressed in pharynx. Is an ortholog of human UBXN6 (UBX domain protein 6). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H06H21.6 | |||||||
| Corresponding_CDS_history | H06H21.6:wp97 | ||||||||
| H06H21.6a:wp264 | |||||||||
| H06H21.6b:wp264 | |||||||||
| Corresponding_transcript | H06H21.6.1 | ||||||||
| Associated_feature | WBsf230024 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00049314 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00062292 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016208 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049313 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033670 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078147 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4671 | ||||||||
| Expr4677 | |||||||||
| Expr6273 | |||||||||
| Expr1025316 | |||||||||
| Expr1038275 | |||||||||
| Expr1153059 | |||||||||
| Expr2017734 | |||||||||
| Expr2035873 | |||||||||
| Drives_construct | WBCnstr00003979 | ||||||||
| WBCnstr00012165 | |||||||||
| WBCnstr00026018 | |||||||||
| Construct_product | WBCnstr00012165 | ||||||||
| WBCnstr00026018 | |||||||||
| Antibody | WBAntibody00002858 | ||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (96) | |||||||||
| Interaction (76) | |||||||||
| Map_info | Map | IV | Position | 1.28692 | Error | 0.004576 | |||
| Positive | Positive_clone | H06H21 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029386 | ||||||||
| WBPaper00037734 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00055951 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
