WormBase Tree Display for Gene: WBGene00018645
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| WBGene00018645 | SMap | S_parent | Sequence | F49F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F49F1.5 | |||||||
| Molecular_name | F49F1.5a | ||||||||
| F49F1.5a.1 | |||||||||
| CE17088 | |||||||||
| F49F1.5b | |||||||||
| CE48537 | |||||||||
| F49F1.5b.1 | |||||||||
| Other_name | CELE_F49F1.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | F49F1.5 | ||||||||
| DB_info | Database | AceView | gene | 4E884 | |||||
| WormQTL | gene | WBGene00018645 | |||||||
| WormFlux | gene | WBGene00018645 | |||||||
| NDB | locus_tag | CELE_F49F1.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018645|UniProtKB=Q9GZE4 | |||||||
| family | PTHR21724 | ||||||||
| NCBI | gene | 186062 | |||||||
| RefSeq | protein | NM_001307492.2 | |||||||
| NM_068085.7 | |||||||||
| TrEMBL | UniProtAcc | U4PRI6 | |||||||
| Q9GZE4 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9GZE4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar00604169 | ||||||||
| WBVar02123921 | |||||||||
| WBVar02133711 | |||||||||
| WBVar02124114 | |||||||||
| WBVar02124696 | |||||||||
| WBVar02121201 | |||||||||
| WBVar02121023 | |||||||||
| WBVar02121770 | |||||||||
| WBVar02122139 | |||||||||
| WBVar01649690 | |||||||||
| WBVar02123244 | |||||||||
| WBVar00902860 | |||||||||
| WBVar00902861 | |||||||||
| WBVar00902862 | |||||||||
| WBVar00902863 | |||||||||
| WBVar00902864 | |||||||||
| WBVar02120501 | |||||||||
| WBVar02123081 | |||||||||
| WBVar01499790 | |||||||||
| WBVar02121616 | |||||||||
| WBVar02124013 | |||||||||
| WBVar02124199 | |||||||||
| WBVar01499633 | |||||||||
| WBVar00422709 | |||||||||
| WBVar00422710 | |||||||||
| WBVar02146253 | |||||||||
| WBVar02124587 | |||||||||
| WBVar02122391 | |||||||||
| WBVar02124792 | |||||||||
| WBVar02122954 | |||||||||
| WBVar00188459 | |||||||||
| WBVar02122592 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (17) | |||||||||
| Paralog (35) | |||||||||
| Structured_description | Automated_description | Enriched in OLL; PVD; head mesodermal cell; and intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirty-one chemicals including Heme; hydrogen sulfide; and Tunicamycin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS (2) | ||||||||
| Corresponding_transcript | F49F1.5a.1 | ||||||||
| F49F1.5b.1 | |||||||||
| Associated_feature | WBsf229945 | ||||||||
| Experimental_info | RNAi_result (5) | ||||||||
| Expr_pattern | Expr1023027 | ||||||||
| Expr1151711 | |||||||||
| Expr2003954 | |||||||||
| Expr2022176 | |||||||||
| Drives_construct | WBCnstr00026362 | ||||||||
| Construct_product | WBCnstr00026362 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (275) | |||||||||
| Interaction | WBInteraction000351265 | ||||||||
| WBInteraction000419064 | |||||||||
| Map_info | Positive | Positive_clone | F49F1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -0.673562 | |||||||
| Reference | WBPaper00031805 | ||||||||
| WBPaper00058665 | |||||||||
| Method | Gene |
