WormBase Tree Display for Gene: WBGene00017997
expand all nodes | collapse all nodes | view schema
| WBGene00017997 | SMap | S_parent | Sequence | F33D4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mrpl-1 | Paper_evidence | WBPaper00042432 | |||||
| Person_evidence | WBPerson261 | ||||||||
| Sequence_name | F33D4.5 | ||||||||
| Molecular_name | F33D4.5 | ||||||||
| F33D4.5.1 | |||||||||
| CE29308 | |||||||||
| F33D4.5.2 | |||||||||
| Other_name | CELE_F33D4.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | mrpl-1 | ||||||||
| DB_info | Database | AceView | gene | 4I472C | |||||
| 4I472 | |||||||||
| WormQTL | gene | WBGene00017997 | |||||||
| WormFlux | gene | WBGene00017997 | |||||||
| NDB | locus_tag | CELE_F33D4.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017997|UniProtKB=Q7KPW7 | |||||||
| family | PTHR23105 | ||||||||
| NCBI | gene | 177549 | |||||||
| RefSeq | protein | NM_068856.6 | |||||||
| TREEFAM | TREEFAM_ID | TF314989 | |||||||
| TrEMBL | UniProtAcc | Q7KPW7 | |||||||
| UniProt_GCRP | UniProtAcc | Q7KPW7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 13 Jan 2014 14:35:58 | WBPerson2970 | Name_change | CGC_name | mrpl-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mrpl | ||||||||
| Allele | WBVar00429212 | ||||||||
| WBVar00429213 | |||||||||
| WBVar00429214 | |||||||||
| WBVar01500079 | |||||||||
| WBVar01499395 | |||||||||
| WBVar01499396 | |||||||||
| WBVar02151493 | |||||||||
| WBVar00190815 | |||||||||
| WBVar02041951 | |||||||||
| WBVar01966634 | |||||||||
| WBVar02020908 | |||||||||
| WBVar01499633 | |||||||||
| WBVar01729918 | |||||||||
| WBVar01729919 | |||||||||
| WBVar01474231 | |||||||||
| WBVar00922827 | |||||||||
| WBVar00922828 | |||||||||
| WBVar00922829 | |||||||||
| WBVar00922830 | |||||||||
| WBVar00922831 | |||||||||
| WBVar00922832 | |||||||||
| WBVar00922833 | |||||||||
| WBVar00922834 | |||||||||
| WBVar00922835 | |||||||||
| WBVar00922836 | |||||||||
| WBVar00922837 | |||||||||
| WBVar00922838 | |||||||||
| WBVar00922839 | |||||||||
| WBVar01500245 | |||||||||
| WBVar00429210 | |||||||||
| WBVar00429211 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00082463 | ||||||||
| 00082464 | |||||||||
| Contained_in_operon | CEOP4240 | ||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00004412 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00004419 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00009993 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00010896 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00012964 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to be located in ribosome. Is an ortholog of human MRPL1 (mitochondrial ribosomal protein L1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F33D4.5 | |||||||
| Corresponding_CDS_history | F33D4.5:wp105 | ||||||||
| F33D4.5:wp115 | |||||||||
| Corresponding_transcript | F33D4.5.1 | ||||||||
| F33D4.5.2 | |||||||||
| Other_sequence (74) | |||||||||
| Associated_feature (2) | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Expr1019954 | ||||||||
| Expr1037751 | |||||||||
| Expr1150093 | |||||||||
| Expr2013704 | |||||||||
| Expr2031939 | |||||||||
| Drives_construct | WBCnstr00026854 | ||||||||
| Construct_product | WBCnstr00026854 | ||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction (62) | |||||||||
| Map_info | Map | IV | Position | 3.40268 | |||||
| Positive | Positive_clone | F33D4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042060 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
