WormBase Tree Display for Gene: WBGene00013144
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WBGene00013144 | SMap | S_parent | Sequence | Y53C12B | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | pno-1 | Person_evidence | WBPerson260 | |||
Sequence_name | Y53C12B.2 | ||||||
Molecular_name | Y53C12B.2 | ||||||
Y53C12B.2.1 | |||||||
CE14896 | |||||||
Other_name | CELE_Y53C12B.2 | Accession_evidence | NDB | BX284602 | |||
Public_name | pno-1 | ||||||
DB_info | Database | AceView | gene | 2K30 | |||
WormQTL | gene | WBGene00013144 | |||||
WormFlux | gene | WBGene00013144 | |||||
NDB | locus_tag | CELE_Y53C12B.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00013144|UniProtKB=O18216 | |||||
family | PTHR12826 | ||||||
NCBI | gene | 174534 | |||||
RefSeq | protein | NM_063698.5 | |||||
SwissProt | UniProtAcc | O18216 | |||||
TREEFAM | TREEFAM_ID | TF300114 | |||||
UniProt_GCRP | UniProtAcc | O18216 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pno | ||||||
Allele | WBVar01499702 | ||||||
WBVar00105398 | |||||||
WBVar01720483 | |||||||
WBVar01498435 | |||||||
WBVar01413786 | |||||||
WBVar01413787 | |||||||
WBVar01413789 | |||||||
WBVar01499017 | |||||||
WBVar01989269 | |||||||
WBVar02123973 | |||||||
WBVar01253206 | |||||||
WBVar02109808 | |||||||
WBVar01309950 | |||||||
WBVar01309952 | |||||||
WBVar01309953 | |||||||
WBVar01499234 | |||||||
WBVar01309954 | |||||||
WBVar01309955 | |||||||
WBVar01309956 | |||||||
WBVar01309957 | |||||||
WBVar01309958 | |||||||
WBVar00247539 | |||||||
WBVar01309959 | |||||||
WBVar01696204 | |||||||
WBVar02156420 | |||||||
WBVar01405503 | |||||||
WBVar01405504 | |||||||
WBVar00174777 | |||||||
WBVar00174778 | |||||||
WBVar00374700 | |||||||
WBVar01943416 | |||||||
WBVar00374701 | |||||||
WBVar01627049 | |||||||
WBVar00374702 | |||||||
WBVar01627050 | |||||||
WBVar00374703 | |||||||
WBVar00374704 | |||||||
WBVar00374705 | |||||||
WBVar00758183 | |||||||
WBVar00758184 | |||||||
WBVar00758185 | |||||||
WBVar00758186 | |||||||
WBVar00758187 | |||||||
WBVar00758188 | |||||||
WBVar01666562 | |||||||
WBVar00758189 | |||||||
WBVar00758190 | |||||||
WBVar00758191 | |||||||
WBVar00758192 | |||||||
WBVar00758193 | |||||||
WBVar00758194 | |||||||
WBVar00758195 | |||||||
WBVar00758196 | |||||||
WBVar00758197 | |||||||
WBVar00758198 | |||||||
WBVar01498940 | |||||||
WBVar00758199 | |||||||
WBVar01642053 | |||||||
WBVar01400274 | |||||||
WBVar01243441 | |||||||
WBVar01400275 | |||||||
Strain | WBStrain00051193 | ||||||
WBStrain00051907 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (9) | |||||||
Contained_in_operon | CEOP2452 | ||||||
Ortholog (35) | |||||||
Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in ribosomal small subunit biogenesis. Predicted to be located in nucleolus. Predicted to be part of small-subunit processome. Is an ortholog of human PNO1 (partner of NOB1 homolog). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info (4) | |||||||
Experimental_info | RNAi_result | WBRNAi00076812 | Inferred_automatically | RNAi_primary | |||
WBRNAi00057256 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00075896 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00009378 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037405 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00106944 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1027618 | ||||||
Expr1035835 | |||||||
Expr1160693 | |||||||
Expr2007837 | |||||||
Expr2026077 | |||||||
Drives_construct | WBCnstr00029745 | ||||||
Construct_product | WBCnstr00029745 | ||||||
Microarray_results (15) | |||||||
Expression_cluster (105) | |||||||
Interaction (194) | |||||||
Map_info | Map | II | Position | 1.70646 | |||
Positive | Positive_clone | Y53C12B | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00049828 | |||||||
WBPaper00055090 | |||||||
WBPaper00058216 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |