WormBase Tree Display for Gene: WBGene00010419
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WBGene00010419 | SMap | S_parent | Sequence | H28O16 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | atp-1 | Person_evidence | WBPerson237 | |||||
Sequence_name | H28O16.1 | ||||||||
Molecular_name | H28O16.1a | ||||||||
H28O16.1a.1 | |||||||||
CE18826 | |||||||||
Other_name | phi-37 | Person_evidence | WBPerson2582 | ||||||
CELE_H28O16.1 | Accession_evidence | NDB | BX284601 | ||||||
Public_name | atp-1 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 17 Mar 2005 13:54:35 | WBPerson2970 | Name_change | Other_name | phi-37 | ||||
3 | 01 Aug 2017 12:58:54 | WBPerson2970 | Name_change | CGC_name | atp-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | atp | ||||||||
Allele | WBVar00159393 | ||||||||
WBVar00159394 | |||||||||
WBVar02114539 | |||||||||
WBVar01574377 | |||||||||
WBVar01574378 | |||||||||
WBVar01426984 | |||||||||
WBVar01476358 | |||||||||
WBVar00348655 | |||||||||
WBVar00348656 | |||||||||
WBVar00348657 | |||||||||
WBVar00348658 | |||||||||
WBVar01499739 | |||||||||
WBVar00348659 | |||||||||
WBVar00348660 | |||||||||
WBVar00348661 | |||||||||
WBVar01412075 | |||||||||
WBVar01849963 | |||||||||
WBVar01849964 | |||||||||
WBVar02128762 | |||||||||
WBVar01499204 | |||||||||
WBVar01932783 | |||||||||
WBVar02002233 | |||||||||
WBVar01532445 | |||||||||
WBVar01433939 | |||||||||
WBVar01433940 | |||||||||
WBVar01664665 | |||||||||
WBVar00267473 | |||||||||
WBVar00267474 | |||||||||
WBVar00267476 | |||||||||
WBVar00267478 | |||||||||
WBVar01499999 | |||||||||
WBVar00680407 | |||||||||
WBVar00680408 | |||||||||
WBVar00680409 | |||||||||
WBVar00680410 | |||||||||
WBVar00680411 | |||||||||
WBVar00680412 | |||||||||
WBVar00680413 | |||||||||
WBVar00680414 | |||||||||
WBVar00680415 | |||||||||
WBVar00680416 | |||||||||
WBVar00680417 | |||||||||
WBVar00680418 | |||||||||
WBVar00680419 | |||||||||
WBVar00680420 | |||||||||
WBVar00680421 | |||||||||
WBVar02121105 | |||||||||
WBVar00680422 | |||||||||
WBVar00680423 | |||||||||
WBVar00680424 | |||||||||
WBVar00680425 | |||||||||
WBVar00093367 | |||||||||
WBVar00680426 | |||||||||
WBVar00680427 | |||||||||
WBVar00680428 | |||||||||
WBVar00680429 | |||||||||
WBVar00680430 | |||||||||
WBVar02056683 | |||||||||
WBVar01392464 | |||||||||
WBVar01498959 | |||||||||
WBVar01392465 | |||||||||
WBVar01392467 | |||||||||
Strain | WBStrain00003396 | ||||||||
WBStrain00002785 | |||||||||
WBStrain00003081 | |||||||||
WBStrain00037556 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (27) | |||||||||
Ortholog (37) | |||||||||
Paralog | WBGene00000229 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00004959 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00006921 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00012040 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00013025 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | H28O16.1 encodes the C. elegans ortholog of the alpha subunit of mitochondrial ATP synthase. | Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 09 Jul 2014 00:00:00 | ||||||||
Automated_description | Enables enterobactin binding activity. Involved in iron import into cell. Located in mitochondrion. Expressed in tail. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 22; mitochondrial complex V (ATP synthase) deficiency nuclear type 4 (multiple); and vascular dementia. Is an ortholog of human ATP5F1A (ATP synthase F1 subunit alpha). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0111498 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:823) | ||||
DOID:8725 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:823) | ||||||
DOID:0070462 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:823) | ||||||
DOID:0070461 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:823) | ||||||
Molecular_info | Corresponding_CDS | H28O16.1a | |||||||
Corresponding_CDS_history | H28O16.1b:wp259 | ||||||||
H28O16.1c:wp259 | |||||||||
H28O16.1d:wp275 | |||||||||
Corresponding_transcript | H28O16.1a.1 | ||||||||
Other_sequence (534) | |||||||||
Associated_feature (13) | |||||||||
Experimental_info | RNAi_result (29) | ||||||||
Expr_pattern (12) | |||||||||
Drives_construct | WBCnstr00003312 | ||||||||
WBCnstr00004575 | |||||||||
WBCnstr00031428 | |||||||||
Construct_product | WBCnstr00031428 | ||||||||
Microarray_results (47) | |||||||||
Expression_cluster (183) | |||||||||
Interaction (263) | |||||||||
Map_info | Map | I | Position | 13.879 | |||||
Positive | Positive_clone | H28O16 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (17) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |