WormBase Tree Display for Gene: WBGene00007658
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WBGene00007658 | SMap | S_parent | Sequence | C17H1 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | pals-4 | Person_evidence | WBPerson260 | |||
Sequence_name | C17H1.5 | ||||||
Molecular_name | C17H1.5 | ||||||
WP:CE15627 | |||||||
CE15627 | |||||||
C17H1.5.1 | |||||||
Other_name | CELE_C17H1.5 | Accession_evidence | NDB | BX284601 | |||
Public_name | pals-4 | ||||||
DB_info | Database | AceView | gene | 1N707 | |||
WormQTL | gene | WBGene00007658 | |||||
WormFlux | gene | WBGene00007658 | |||||
NDB | locus_tag | CELE_C17H1.5 | |||||
NCBI | gene | 182747 | |||||
RefSeq | mRNA | NM_060896.1 | |||||
protein | NP_493297.1 | ||||||
NM_060896.2 | |||||||
TREEFAM | TREEFAM_ID | TF322878 | |||||
UniProt | UniProtAcc | O45256 | |||||
TrEMBL | UniProtAcc | O45256 | |||||
UniProt_GCRP | UniProtAcc | O45256 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pals | ||||||
Allele | WBVar02120442 | ||||||
WBVar01499739 | |||||||
WBVar02075490 | |||||||
WBVar02124149 | |||||||
WBVar02124150 | |||||||
WBVar02074586 | |||||||
WBVar01499230 | |||||||
WBVar00349632 | |||||||
WBVar00349633 | |||||||
WBVar00349634 | |||||||
WBVar00349635 | |||||||
WBVar00349636 | |||||||
WBVar00349637 | |||||||
WBVar02151527 | |||||||
WBVar02069222 | |||||||
WBVar00683344 | |||||||
WBVar00683345 | |||||||
WBVar00683346 | |||||||
WBVar01499999 | |||||||
WBVar00683347 | |||||||
WBVar00683348 | |||||||
WBVar00683349 | |||||||
WBVar00683350 | |||||||
WBVar00683351 | |||||||
WBVar00683352 | |||||||
WBVar00683353 | |||||||
WBVar00683354 | |||||||
WBVar00683355 | |||||||
WBVar00683356 | |||||||
WBVar00683357 | |||||||
WBVar00683358 | |||||||
WBVar00683359 | |||||||
WBVar00683360 | |||||||
WBVar00683361 | |||||||
WBVar00683362 | |||||||
WBVar00683363 | |||||||
WBVar02120914 | |||||||
WBVar00683364 | |||||||
WBVar00683365 | |||||||
WBVar00683366 | |||||||
WBVar02123874 | |||||||
WBVar02128856 | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | Sp34_50055100 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | |||
chrI_pilon.g2652 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Paralog | WBGene00007656 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WormBase-Compara | |||||||
WBGene00007662 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
WBGene00009061 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
WBGene00013294 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00016281 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00044237 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00044711 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Enriched in dopaminergic neurons based on tiling array studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including D-glucose; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C17H1.5 | |||||
Corresponding_transcript | C17H1.5.1 | ||||||
Experimental_info | RNAi_result | WBRNAi00029027 | Inferred_automatically | RNAi_primary | |||
WBRNAi00040848 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00002982 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1144895 | ||||||
Drives_construct | WBCnstr00033574 | ||||||
Construct_product | WBCnstr00033574 | ||||||
Microarray_results (13) | |||||||
Expression_cluster (161) | |||||||
Interaction (21) | |||||||
Map_info | Map | I | Position | 17.2202 | |||
Positive | Positive_clone | C17H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00057312 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |