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WormBase Tree Display for Gene: WBGene00004061

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Name Class

WBGene00004061EvidencePerson_evidenceWBPerson583
WBPerson36
CGC_data_submission
SMapS_parentSequenceC06A12
IdentityVersion1
NameCGC_namepmp-4Person_evidenceWBPerson36
Sequence_nameT02D1.5
Molecular_nameT02D1.5
T02D1.5.1
CE16325
Other_nametag-14CGC_data_submission
CELE_T02D1.5Accession_evidenceNDBBX284604
Public_namepmp-4
DB_infoDatabaseAceViewgene4S346
WormQTLgeneWBGene00004061
NDBlocus_tagCELE_T02D1.5
PanthergeneCAEEL|WormBase=WBGene00004061|UniProtKB=O45730
familyPTHR11384
NCBIgene24104835
RefSeqproteinNM_001306751.3
TREEFAMTREEFAM_IDTF105205
TrEMBLUniProtAccO45730
UniProt_GCRPUniProtAccO45730
OMIMgene300371
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:34WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpmp
AlleleWBVar00602837
WBVar01499527
WBVar01800003
WBVar01800004
WBVar02109389
WBVar02004328
WBVar02004329
WBVar02004330
WBVar02004331
WBVar02004332
WBVar01848287
WBVar01498996
WBVar00446562
WBVar02038754
WBVar02038755
WBVar00446563
WBVar00446564
WBVar00446565
WBVar00446566
WBVar00446567
WBVar00446568
WBVar00446569
WBVar00271231
WBVar01498676
WBVar00091691
WBVar01498687
WBVar01457184
WBVar01457185
WBVar01498341
WBVar01457186
WBVar01457187
WBVar01457188
WBVar01457189
WBVar01673192
WBVar01673193
WBVar01673194
WBVar01673195
WBVar01673196
WBVar01673197
WBVar01673198
WBVar01673199
WBVar02135496
WBVar01673200
WBVar01673201
WBVar01673202
WBVar01673203
WBVar01673204
WBVar01673205
WBVar01673206
WBVar01673207
WBVar01673208
WBVar01673209
WBVar01673210
WBVar01840854
WBVar01673211
WBVar01673212
WBVar01840855
WBVar01840856
WBVar01673213
WBVar01673214
WBVar01673215
WBVar01673216
WBVar01673217
WBVar01673218
WBVar01673219
WBVar01673220
WBVar00200394
WBVar01673221
WBVar01673222
WBVar01673223
WBVar01673224
WBVar01673225
WBVar00975865
WBVar01673226
WBVar00975866
WBVar01673227
WBVar00975867
WBVar00975868
WBVar01673228
WBVar01673229
WBVar00975869
WBVar00975870
WBVar01661058
WBVar01673230
WBVar01661059
WBVar00975871
WBVar01673231
WBVar01673232
WBVar01661060
WBVar00975872
WBVar01673233
WBVar00975873
WBVar01673234
WBVar00975874
WBVar01673235
WBVar00975875
WBVar00975876
WBVar01673236
WBVar00975877
WBVar01673237
WBVar01673238
WBVar00975878
WBVar00975879
WBVar01500245
WBVar00975880
WBVar00975881
WBVar02098328
WBVar02098329
StrainWBStrain00001302
WBStrain00031414
WBStrain00035573
RNASeq_FPKM (74)
GO_annotation (16)
Ortholog (42)
ParalogWBGene00004058Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00004059Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00004060Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00004062Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionThe pmp-4 gene encodes a homolog of human ALD, which when mutated leads to X-linked adrenoleukodystrophy (OMIM:300100).Paper_evidenceWBPaper00004103
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable ATP binding activity; ATPase-coupled transmembrane transporter activity; and long-chain fatty acid transporter activity. Predicted to be involved in fatty acid catabolic process; long-chain fatty acid import into peroxisome; and peroxisome organization. Predicted to be located in peroxisomal membrane. Used to study adrenoleukodystrophy. Human ortholog(s) of this gene implicated in adrenoleukodystrophy. Is an ortholog of human ABCD1 (ATP binding cassette subfamily D member 1) and ABCD2 (ATP binding cassette subfamily D member 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_info (2)
Models_disease_assertedWBDOannot00000840
WBDOannot00000841
Molecular_infoCorresponding_CDST02D1.5
Corresponding_transcriptT02D1.5.1
Other_sequence (31)
Associated_featureWBsf652423
WBsf668588
WBsf717215
Experimental_infoRNAi_resultWBRNAi00018023Inferred_automaticallyRNAi_primary
WBRNAi00002422Inferred_automaticallyRNAi_primary
WBRNAi00035055Inferred_automaticallyRNAi_primary
WBRNAi00052205Inferred_automaticallyRNAi_primary
Expr_patternExpr6572
Expr15211
Expr15212
Expr15213
Expr1018172
Expr1031959
Expr1155835
Expr2014975
Expr2033210
Drives_constructWBCnstr00002195
WBCnstr00035715
WBCnstr00042070
WBCnstr00042071
WBCnstr00042089
Construct_productWBCnstr00035715
WBCnstr00042071
WBCnstr00042089
AntibodyWBAntibody00002912
Microarray_results (22)
Expression_cluster (164)
Interaction (100)
Map_infoMapIVPosition16.8463Error0.037163
PositivePositive_cloneT02D1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4778
4901
Pseudo_map_position
ReferenceWBPaper00016821
WBPaper00027644
WBPaper00031484
WBPaper00038491
WBPaper00047097
WBPaper00055090
WBPaper00059252
WBPaper00060821
WBPaper00065331
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene