WormBase Tree Display for Gene: WBGene00007533

WBGene00007533 SMap: S_parent: Sequence: C12C8
  Identity: Version: 2
    Name: CGC_name: cbl-1 Person_evidence: WBPerson151
            WBPerson14155
      Sequence_name: C12C8.2
      Molecular_name: C12C8.2a
        C12C8.2a.1
        CE36100
        C12C8.2b
        CE40901
        C12C8.2b.1
      Other_name: CELE_C12C8.2 Accession_evidence: NDB BX284601
      Public_name: cbl-1
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 31 Aug 2011 09:11:34 WBPerson2970 Name_change: CGC_name: cbl-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cbl
    Allele: WBVar00094041
      WBVar01422045
      WBVar00660235
      WBVar00660236
      WBVar00660237
      WBVar00660238
      WBVar00660239
      WBVar00660240
      WBVar00660241
      WBVar00660242
      WBVar00660243
      WBVar00660244
      WBVar00660245
      WBVar01500105
      WBVar01499739
      WBVar02046949
      WBVar01499786
      WBVar01499054
      WBVar00094147
      WBVar00155735
      WBVar00155736
      WBVar00341789
      WBVar00341790
      WBVar00341791
      WBVar00341792
      WBVar00341793
      WBVar01498959
    Strain: WBStrain00032944
      WBStrain00037169
    RNASeq_FPKM (74)
    GO_annotation: 00004777
      00004778
      00004779
      00004780
      00004781
      00004782
      00004783
      00004784
      00115639
      00115640
    Ortholog (34)
    Paralog: WBGene00022856 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00009048 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: cbl-1 encodes a putative cystathionine gamma-lyase orthologous to human CTH (OMIM:607657, mutated in cystathioninuria), and paralogous to CTH-1 and CTH-2; CBL-1, unlike its paralog CTH-2, does not inhibit DHC-1 in vivo. Paper_evidence: WBPaper00030897
          Curator_confirmed: WBPerson1843
            WBPerson567
          Date_last_updated: 15 Sep 2011 00:00:00
      Automated_description: Predicted to enable carbon-sulfur lyase activity and pyridoxal phosphate binding activity. Predicted to be involved in transsulfuration. Predicted to be located in cytoplasm. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C12C8.2a
      C12C8.2b
    Corresponding_CDS_history: C12C8.2:wp114
    Corresponding_transcript: C12C8.2a.1
      C12C8.2b.1
    Other_sequence (71)
    Associated_feature: WBsf643578
      WBsf984651
      WBsf1010350
      WBsf218270
      WBsf218271
      WBsf218272
  Experimental_info: RNAi_result: WBRNAi00028816 Inferred_automatically: RNAi_primary
      WBRNAi00076114 Inferred_automatically: RNAi_primary
      WBRNAi00002946 Inferred_automatically: RNAi_primary
      WBRNAi00040373 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020008
      Expr1033242
      Expr1144435
      Expr2009739
      Expr2027979
    Drives_construct: WBCnstr00033670
    Construct_product: WBCnstr00033670
    Microarray_results: SMD_C12C8.2
      175512_s_at
      193837_at
      A_12_P115075
      A_12_P157745
      A_12_P157746
      A_12_P157747
      Aff_C12C8.2
      GPL13394_WBGene00007533
      GPL13914_C12C8.2
      GPL14144_C12C8.2a_1039-1098_0.942_5_B
      GPL14144_C12C8.2a_1201-1260_0.960_1_A
      GPL14144_C12C8.2a_1318-1377_0.941_6_C
      GPL19516_CGZ0004299
      GPL19516_CGZ0004300
      GPL21109_C12C8.2b
      GPL3518_CE17400
      GPL8304_CE_WBGene00007533_A
      GPL8304_CE_WBGene00007533_B
      GPL8673_C12C8_2P00377
      GPL8673_C12C8_2P00887
      GPL8673_C12C8_2P01245
      GPL9450_C12C8.2
      cea2.p.01994
    Expression_cluster (267)
    SAGE_tag (13)
    Interaction: WBInteraction000140494
      WBInteraction000153305
      WBInteraction000157770
      WBInteraction000174852
      WBInteraction000179723
      WBInteraction000183506
      WBInteraction000187754
      WBInteraction000195515
      WBInteraction000202135
      WBInteraction000204482
      WBInteraction000205624
      WBInteraction000210030
      WBInteraction000214626
      WBInteraction000215052
      WBInteraction000221339
      WBInteraction000222029
      WBInteraction000233901
      WBInteraction000238931
      WBInteraction000248608
      WBInteraction000257948
      WBInteraction000275871
      WBInteraction000280506
      WBInteraction000283686
      WBInteraction000286222
      WBInteraction000291266
      WBInteraction000291726
      WBInteraction000293119
      WBInteraction000295311
      WBInteraction000303116
      WBInteraction000305410
      WBInteraction000321420
      WBInteraction000331611
      WBInteraction000338926
      WBInteraction000345652
      WBInteraction000346203
      WBInteraction000358988
      WBInteraction000370874
      WBInteraction000380368
      WBInteraction000387433
      WBInteraction000392466
      WBInteraction000400774
      WBInteraction000402613
      WBInteraction000407353
      WBInteraction000410515
      WBInteraction000411528
      WBInteraction000413504
      WBInteraction000415262
      WBInteraction000420670
      WBInteraction000438365
      WBInteraction000441800
      WBInteraction000442483
      WBInteraction000451434
      WBInteraction000460391
      WBInteraction000544742
      WBInteraction000577834
  Map_info: Map: I Position: 3.74609 Error: 0.001417
    Positive: Positive_clone: C12C8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00040475
    WBPaper00041771
    WBPaper00042204
    WBPaper00055090
    WBPaper00065026
    WBPaper00065331
    WBPaper00065566
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene