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WormBase Tree Display for Gene: WBGene00016011

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Name Class

WBGene00016011SMapS_parentSequenceC23G10
IdentityVersion1
NameSequence_nameC23G10.2
Molecular_nameC23G10.2a
C23G10.2a.1
CE37747
C23G10.2b
CE30613
C23G10.2c
CE37748
C23G10.2a.2
C23G10.2b.1
C23G10.2c.1
Other_nameCELE_C23G10.2Accession_evidenceNDBBX284603
Public_nameC23G10.2
DB_infoDatabaseAceViewgene3H299
WormQTLgeneWBGene00016011
WormFluxgeneWBGene00016011
NDBlocus_tagCELE_C23G10.2
PanthergeneCAEEL|WormBase=WBGene00016011|UniProtKB=Q10121
familyPTHR11803
NCBIgene182812
RefSeqproteinNM_001026008.6
NM_171873.6
NM_171154.8
SwissProtUniProtAccQ10121
TREEFAMTREEFAM_IDTF105775
UniProt_GCRPUniProtAccQ10121
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar01500260
WBVar00399415
WBVar00399416
WBVar00399417
WBVar01489412
WBVar01500122
WBVar01500123
WBVar01645003
WBVar01645004
WBVar02156789
WBVar00832224
WBVar00832225
WBVar00832226
WBVar00832227
WBVar00832228
RNASeq_FPKM (74)
GO_annotation00056107
00056108
00056109
00056110
Contained_in_operonCEOP3356
Ortholog (34)
Structured_descriptionAutomated_descriptionPredicted to enable deaminase activity. Predicted to be involved in organonitrogen compound catabolic process. Predicted to be located in cytosol and mitochondrion. Is an ortholog of human RIDA (reactive intermediate imine deaminase A homolog).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC23G10.2a
C23G10.2b
C23G10.2c
Corresponding_CDS_historyC23G10.2a:wp135
Corresponding_transcriptC23G10.2a.1
C23G10.2a.2
C23G10.2b.1
C23G10.2c.1
Other_sequence (50)
Associated_featureWBsf645252
WBsf645253
WBsf225071
WBsf225072
Experimental_infoRNAi_resultWBRNAi00029109Inferred_automaticallyRNAi_primary
WBRNAi00094190Inferred_automaticallyRNAi_primary
WBRNAi00041006Inferred_automaticallyRNAi_primary
WBRNAi00106723Inferred_automaticallyRNAi_primary
WBRNAi00005687Inferred_automaticallyRNAi_primary
WBRNAi00094485Inferred_automaticallyRNAi_primary
WBRNAi00094286Inferred_automaticallyRNAi_primary
WBRNAi00011050Inferred_automaticallyRNAi_primary
WBRNAi00094369Inferred_automaticallyRNAi_primary
Expr_patternExpr1016462
Expr1036839
Expr1145051
Expr2001009
Expr2019227
Drives_constructWBCnstr00028388
Construct_productWBCnstr00028388
Microarray_results (32)
Expression_clusterWBPaper00032528:L3_enriched
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:germline-precursors_embryo_enriched
WBPaper00037950:germline-precursors_embryo_SelectivelyEnriched
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:hypodermis_larva_SelectivelyEnriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038289:oocyte_protein
WBPaper00040209:B.thuringiensis_upregulated_MY15
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00044746:aging_downregulated_Day5
WBPaper00045420:fertilization_downregulated_protein
WBPaper00045460:Co-expression_Cluster_3
WBPaper00046303:P.aeruginosa_downregulated_protein
WBPaper00046509:htz-1(ok3099)_downregulated
WBPaper00046887:WNT-target
WBPaper00048910:mRNA-interacting_protein
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00050344:AFD-neuron_enriched
WBPaper00050344:ASER-neuron_enriched
WBPaper00050344:PLM-neuron_enriched
WBPaper00050412:cco-1(RNAi)_downregulated_N2
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:pharynx_expressed
WBPaper00051039:germline_enriched
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:epidermis_nucleus_expressed
WBPaper00051245:nucleus_specific
WBPaper00051555:atm-1(gk186)_regulated_protein
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053321:PGCs_enriched_NuGen
WBPaper00053388:dauer_regulated_Cluster3
WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
WBPaper00055049:S.gordonii_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055482:pmt-2(RNAi)_downregulated
WBPaper00055648:germline_expressed
WBPaper00056275:P.aeruginosa_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056826:SGP_biased
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057288:Cold_downregulated_protein
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00059356:set-6(ok2195)_baz-2(tm0235)_regulated
WBPaper00059816:crh-1(n3315)_downrgulated
WBPaper00060084:cco-1(RNAi)_downregulated_N2
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061377:MYRF-1_interacting
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061527:F45H10.2-R53.4_21676
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062590:Aging_downregulated_neuron
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064055:trl-1(cas1077)_downregulated_non-starved
WBPaper00064055:trl-1(cas1077)_downregulated_starved
WBPaper00064071:NHR-49_interacting
WBPaper00065120:body-muscle-transcriptome
WBPaper00065373:Cisplatin_downregulated_WT
cgc4386_cluster_1_5
cgc4489_group_3
WBPaper00005124:testosterone_10-9M_regulated
WBPaper00025032:cluster_29
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030985:Serratia_marcesens_upregulated
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00032062:age_regulated_genes
WBPaper00036375:depleted_in_PVD_OLL
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040963:TA300_up
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00047070:N2_starvation_downregulated
WBPaper00048989:eat-2(ad465)_downregulated_in-DMSO
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
[cgc5767]:cluster_8
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
Interaction (34)
Map_infoPositivePositive_cloneC23G10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-1.40874
ReferenceWBPaper00038491
WBPaper00049828
WBPaper00055090
MethodGene