WormBase Tree Display for CDS: Y39E4B.8
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Y39E4B.8 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y39E4B | |||
Structure | Source_exons | 1 | 55 | |||
5534 | 5676 | |||||
9280 | 9398 | |||||
10220 | 10341 | |||||
10564 | 10707 | |||||
12880 | 13017 | |||||
13868 | 13953 | |||||
DB_info | Database | SwissProt | UniProtAcc | G5ED00 | ||
UniProt | UniProtAcc | G5ED00 | ||||
UniProt_GCRP | UniProtAcc | G5ED00 | ||||
AlphaFold | entry | G5ED00 | ||||
NCBI_protein | GI_number | GI:6425263 | ||||
TREEFAM | TREEFAM_ID | TF351101 | ||||
Protein_id | CHROMOSOME_III | CAB54429 | 2 | |||
DB_remark | ZIG-8 protein; contains similarity to Pfam domains PF00047 (Immunoglobulin domain), PF07686 (Immunoglobulin V-set domain); contains similarity to Interpro domains IPR003599 (Immunoglobulin subtype), IPR003598 (Immunoglobulin subtype 2), IPR013783 (Immunoglobulin-like fold), IPR013106 (Immunoglobulin V-set domain), IPR036179 (Immunoglobulin-like domain superfamily), IPR037448 (Zwei Ig domain protein zig-8), IPR013151 (Immunoglobulin) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00006985 | ||||
Corresponding_transcript | Y39E4B.8.1 | |||||
Corresponding_protein | CE24241 | |||||
Corresponding_PCR_product | cenix:180-e4 | |||||
mv_Y39E4B.8 | ||||||
sjj_Y39E4B.8 | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA (24) | ||||||
RNAi_result | WBRNAi00056250 | |||||
WBRNAi00036950 | ||||||
WBRNAi00020406 | ||||||
Microarray_results (18) | ||||||
Brief_identification | Zwei Ig domain protein zig-8 | Accession_evidence | UniProt | SP:G5ED00 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |