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WormBase Tree Display for CDS: F53G2.12b

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Name Class

F53G2.12bSMapS_parentSequenceF53G2
StructureSource_exons139
DB_infoDatabaseTrEMBLUniProtAccA0A2K5ATR1
UniProtUniProtAccA0A2K5ATR1
AlphaFoldentryA0A2K5ATR1
NCBI_proteinGI_numberGI:1394370990
Protein_idCHROMOSOME_IISPC472972
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
IsoformCurator_confirmedWBPerson4025
VisibleGeneWBGene00302998
Corresponding_transcriptF53G2.12b.1
Corresponding_proteinCE52616
Corresponding_PCR_productmv_F53G2.b
Brief_identificationComplex1_LYR_dom domain-containing proteinAccession_evidenceUniProtTR:A0A2R8F5A8
RNASeq_FPKM (74)
Last_reviewed13 Dec 2017 10:22:36WBPerson4025
RemarkThis small isoform was added to represent the small open reading frame (sORF) described in the database 'sORF.org'. It is possible that this is a 'micro ORF'. No initial Methionine codon is present; it is possible that this uses a non-canonical initiation codon.Paper_evidenceWBPaper00053415
Curator_confirmedWBPerson4025
[180219 gw3] This Gene has been split away from F53G2.7 because it is a dicistronic mRNA operon.Curator_confirmedWBPerson4025
[180510 gw3] This has a non-canonical initiation site.
[180510 gw3] This is a possible 'micro ORF'.
This starts with a codon for Leucine which is an acceptable alternative initiation codon in the NCBI translation table
Methodcurated