WormBase Tree Display for CDS: F38A5.5
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F38A5.5 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | F38A5 | ||
Structure | Source_exons | 1 | 195 | ||
247 | 300 | ||||
DB_info | Database | TrEMBL | UniProtAcc | Q94212 | |
UniProt | UniProtAcc | Q94212 | |||
UniProt_GCRP | UniProtAcc | Q94212 | |||
AlphaFold | entry | Q94212 | |||
NCBI_protein | GI_number | GI:351059583 | |||
TREEFAM | TREEFAM_ID | TF319426 | |||
Protein_id | CHROMOSOME_IV | CCD67172 | 1 | ||
DB_remark | NSPB-3 protein; contains similarity to Pfam domain PF07312 (Protein of unknown function (DUF1459)); contains similarity to Interpro domain IPR009924 (Protein of unknown function DUF1459) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | WBGene00018162 | |||
Corresponding_transcript | F38A5.5.1 | ||||
Corresponding_protein | CE10034 | ||||
Corresponding_PCR_product (3) | |||||
Corresponding_oligo_set | 172417_x_at | ||||
172595_x_at | |||||
185454_s_at | |||||
A_12_P110586 | |||||
GPL19516_CGZ0020360 | |||||
GPL21109_F38A5.5 | |||||
GPL3518_CE10034 | |||||
GPL8304_CE_WBGene00018162_A | |||||
GPL8673_F38A5_5P00158 | |||||
Matching_cDNA | L4_Nanopore_Roach_13757 | Inferred_automatically | transcript_builder.pl | ||
L4_Nanopore_Roach_20240 | |||||
L1_Nanopore_Roach_97612 | |||||
YA_Nanopore_Li_23467 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | WBRNAi00008764 | ||||
WBRNAi00025434 | |||||
WBRNAi00069426 | |||||
WBRNAi00085531 | |||||
WBRNAi00014533 | |||||
WBRNAi00014526 | |||||
WBRNAi00014524 | |||||
WBRNAi00046674 | |||||
Microarray_results | SMD_F38A5.5 | ||||
172417_x_at | |||||
172595_x_at | |||||
185454_s_at | |||||
A_12_P110586 | |||||
GPL19516_CGZ0020360 | |||||
GPL21109_F38A5.5 | |||||
GPL3518_CE10034 | |||||
GPL8304_CE_WBGene00018162_A | |||||
GPL8673_F38A5_5P00158 | |||||
RNASeq_FPKM (74) | |||||
Last_reviewed | 15 Oct 2013 00:00:00 | WBPerson4025 | |||
Method | curated |