WormBase Tree Display for CDS: C55B7.4a
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C55B7.4a | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
Feature_evidence | WBsf949221 | |||||
SMap | S_parent | Sequence | C55B7 | |||
Structure | Source_exons | 1 | 175 | |||
222 | 322 | |||||
630 | 1073 | |||||
1123 | 1219 | |||||
1265 | 1410 | |||||
1457 | 1594 | |||||
1830 | 2012 | |||||
DB_info | Database | TrEMBL | UniProtAcc | H2KZG6 | ||
UniProt | UniProtAcc | H2KZG6 | ||||
UniProt_GCRP | UniProtAcc | H2KZG6 | ||||
AlphaFold | entry | H2KZG6 | ||||
NCBI_protein | GI_number | GI:351060422 | ||||
TREEFAM | TREEFAM_ID | TF105055 | ||||
Protein_id | CHROMOSOME_I | CCD68091 | 1 | |||
DB_remark | ACDH-1 protein; contains similarity to Pfam domains PF00441 (Acyl-CoA dehydrogenase, C-terminal domain), PF02770 (Acyl-CoA dehydrogenase, middle domain), PF02771 (Acyl-CoA dehydrogenase, N-terminal domain); contains similarity to Interpro domains IPR013786 (Acyl-CoA dehydrogenase/oxidase, N-terminal), IPR006091 (Acyl-CoA oxidase/dehydrogenase, middle domain), IPR036250 (Acyl-CoA dehydrogenase-like, C-terminal), IPR037069 (Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily), IPR046373 (Acyl-CoA oxidase/dehydrogenase, middle domain superfamily), IPR009100 (Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily), IPR009075 (Acyl-CoA dehydrogenase/oxidase, C-terminal) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Accession_evidence | EMBL | BJ776343 | |||
Visible | Gene | WBGene00016943 | ||||
Corresponding_transcript | C55B7.4a.1 | |||||
Corresponding_protein | CE09015 | |||||
Corresponding_PCR_product | cenix:71-c7 | |||||
mv_C55B7.4 | ||||||
sjj_C55B7.4 | ||||||
Corresponding_oligo_set (26) | ||||||
Matching_cDNA (314) | ||||||
RNAi_result (14) | ||||||
Microarray_results (32) | ||||||
Brief_identification | Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial | Accession_evidence | UniProt | TR:H2KZG6 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |