WormBase Tree Display for CDS: Y39H10A.2c
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Y39H10A.2c | Evidence | Curator_confirmed | WBPerson4025 | |||
---|---|---|---|---|---|---|
Inferred_automatically | make_isoforms.pl | |||||
SMap | S_parent | Sequence | Y39H10A | |||
Structure | Source_exons | 1 | 10 | |||
58 | 428 | |||||
475 | 701 | |||||
1064 | 1175 | |||||
1221 | 1336 | |||||
1549 | 1762 | |||||
1816 | 2019 | |||||
DB_info | Database | TrEMBL | UniProtAcc | A0A168HAD6 | ||
UniProt | UniProtAcc | A0A168HAD6 | ||||
AlphaFold | entry | A0A168HAD6 | ||||
NCBI_protein | GI_number | GI:1027499705 | ||||
Protein_id | CHROMOSOME_V | SAP35602 | 1 | |||
DB_remark | OAC-55 protein; contains similarity to Pfam domain PF01757 (Acyltransferase family); contains similarity to Interpro domain IPR002656 (Acyltransferase 3 domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Curator_confirmed | WBPerson4025 | ||||
Feature_evidence | WBsf969598 | |||||
Visible | Gene | WBGene00021479 | ||||
Corresponding_transcript | Y39H10A.2c.1 | |||||
Corresponding_protein | CE51641 | |||||
Corresponding_PCR_product | cenix:99-h4 | |||||
mv_Y39H10A.h | ||||||
sjj_Y39H10A_224.e | ||||||
Corresponding_oligo_set (16) | ||||||
RNAi_result | WBRNAi00000906 | |||||
WBRNAi00036962 | ||||||
WBRNAi00056292 | ||||||
Microarray_results (18) | ||||||
Brief_identification | Acyltransferase 3 domain-containing protein | Accession_evidence | UniProt | TR:A0A168HAD6 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 23 Mar 2016 14:25:49 | WBPerson4025 | ||||
Remark | [160323 gw3] Created this isoform based on the RNASeq splice data and the SL1 site. | Curator_confirmed | WBPerson4025 | |||
Feature_evidence | WBsf969598 | |||||
From_analysis | RNASeq | |||||
Method | curated |