WormBase Tree Display for Gene: WBGene00021479
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| WBGene00021479 | SMap | S_parent | Sequence | Y39H10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | oac-55 | Person_evidence | WBPerson567 | |||||
| Sequence_name | Y39H10A.2 | ||||||||
| Molecular_name | Y39H10A.2a | ||||||||
| Y39H10A.2a.1 | |||||||||
| CE21778 | |||||||||
| Y39H10A.2b | |||||||||
| CE51648 | |||||||||
| Y39H10A.2c | |||||||||
| CE51641 | |||||||||
| Y39H10A.2b.1 | |||||||||
| Y39H10A.2c.1 | |||||||||
| Other_name | Y39H10A.h | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y39H10A.2 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | oac-55 | ||||||||
| DB_info | Database | AceView | gene | 5E243 | |||||
| WormQTL | gene | WBGene00021479 | |||||||
| WormFlux | gene | WBGene00021479 | |||||||
| NDB | locus_tag | CELE_Y39H10A.2 | |||||||
| Panther | gene | CAEEL|Gene_ORFName=CELE_Y39H10A.2|UniProtKB=A0A164D3K0 | |||||||
| family | PTHR11161 | ||||||||
| NCBI | gene | 178792 | |||||||
| RefSeq | protein | NM_001330808.1 | |||||||
| NM_001330807.1 | |||||||||
| NM_071640.2 | |||||||||
| TrEMBL | UniProtAcc | Q9N3Z2 | |||||||
| A0A164D3K0 | |||||||||
| A0A168HAD6 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A164D3K0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 Jul 2008 14:49:34 | WBPerson2970 | Name_change | CGC_name | oac-55 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | oac | ||||||||
| Allele (133) | |||||||||
| Possibly_affected_by | WBVar02154059 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00002286 | ||||||||
| 00002370 | |||||||||
| 00125828 | |||||||||
| Ortholog (52) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to enable acyltransferase activity, transferring groups other than amino-acyl groups. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y39H10A.2a | |||||||
| Y39H10A.2b | |||||||||
| Y39H10A.2c | |||||||||
| Corresponding_transcript | Y39H10A.2a.1 | ||||||||
| Y39H10A.2b.1 | |||||||||
| Y39H10A.2c.1 | |||||||||
| Other_sequence | Acan_isotig10195 | ||||||||
| ACC15681_1 | |||||||||
| FC554895.1 | |||||||||
| FC539041.1 | |||||||||
| EY469797.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000906 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00036962 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056292 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017272 | ||||||||
| Expr1159779 | |||||||||
| Expr2014578 | |||||||||
| Expr2032811 | |||||||||
| Drives_construct | WBCnstr00024535 | ||||||||
| Construct_product | WBCnstr00024535 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (96) | |||||||||
| Map_info | Map | V | Position | -8.00453 | Error | 0.003355 | |||
| Positive | Positive_clone | Y39H10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
