WormBase Tree Display for CDS: Y110A7A.17b
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Y110A7A.17b | SMap | S_parent | Sequence | Y110A7A | ||
---|---|---|---|---|---|---|
Structure | Source_exons (11) | |||||
DB_info | Database | SwissProt | UniProtAcc | Q9N593 | ||
UniProt | UniProtAcc | Q9N593 | ||||
UniProt_GCRP | UniProtAcc | Q9N593 | ||||
AlphaFold | entry | Q9N593 | ||||
Protein_id | CHROMOSOME_I | CCD66210 | 2 | |||
DB_remark | MAT-1 protein; contains similarity to Pfam domains PF12895 (Anaphase-promoting complex, cyclosome, subunit 3), PF13181 (Tetratricopeptide repeat), PF13432 (Tetratricopeptide repeat); contains similarity to Interpro domains IPR019734 (Tetratricopeptide repeat), IPR011990 (Tetratricopeptide-like helical domain superfamily) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Accession_evidence | EMBL | BJ765842 | |||
Visible | Gene | WBGene00003132 | ||||
Corresponding_transcript | Y110A7A.17b.1 | |||||
Corresponding_protein | CE53900 | |||||
Corresponding_PCR_product | cenix:141-b12 | |||||
mv_Y110A7A.17 | ||||||
sjj_Y110A7A.d | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA (21) | ||||||
RNAi_result (24) | ||||||
Microarray_results (18) | ||||||
Brief_identification | Cell division cycle protein 27 homolog | Accession_evidence | UniProt | SP:Q9N593 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 08 Oct 2019 15:31:46 | WBPerson4025 | ||||
Remark | [20040706 po] made isoform based on EST data(yk1635h11.5) | Curator_confirmed | WBPerson1867 | |||
[191008 gw3] This CDS has been updated based on the RNAseq data. | Curator_confirmed | WBPerson4025 | ||||
From_analysis | RNASeq | |||||
Method | curated |