WormBase Tree Display for CDS: Y105C5B.21f

Y105C5B.21f Evidence: Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: Y105C5B
  Structure: Source_exons (12)
  DB_info: Database: TrEMBL UniProtAcc A0A078BPN7
      UniProt UniProtAcc A0A078BPN7
      AlphaFold entry A0A078BPN7
      NCBI_protein GI_number GI:671688084
    Protein_id: CHROMOSOME_IV CDX47505 1
    DB_remark: JAC-1 protein; contains similarity to Pfam domains PF00041 (Fibronectin type III domain), PF00514 (Armadillo/beta-catenin-like repeat); contains similarity to Interpro domains IPR000225 (Armadillo), IPR028435 (Plakophilin/Delta catenin), IPR011989 (Armadillo-like helical), IPR003961 (Fibronectin type III), IPR013783 (Immunoglobulin-like fold), IPR036116 (Fibronectin type III superfamily), IPR016024 (Armadillo-type fold)
  Origin: From_laboratory: HX
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Confirmed
    Isoform: Curator_confirmed: WBPerson4025
      Feature_evidence: WBsf176039
  Visible: Gene: WBGene00002175
    Corresponding_transcript: Y105C5B.21f.1
    Corresponding_protein: CE50073
    Corresponding_PCR_product: cenix:141-e11
      mv_Y105C5B.21
    Corresponding_oligo_set (16)
    Matching_cDNA (11)
    RNAi_result: WBRNAi00092918
      WBRNAi00101414
      WBRNAi00036476
      WBRNAi00101432
      WBRNAi00080604
      WBRNAi00055199
    Microarray_results (19)
    Brief_identification: Fibronectin type-III domain-containing protein Accession_evidence: UniProt TR:A0A078BPN7
    RNASeq_FPKM (74)
    Last_reviewed: 12 Jun 2014 00:00:00 WBPerson4025
    Remark: [140612 gw3] Created this isoform based on the RNASeq splice data and the SL1 site. Curator_confirmed: WBPerson4025
        Feature_evidence: WBsf176039
        From_analysis: RNASeq
  Method: curated