WormBase Tree Display for CDS: T13F2.1b
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T13F2.1b | SMap | S_parent | Sequence | T13F2 | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 318 | |||
396 | 689 | |||||
737 | 804 | |||||
851 | 942 | |||||
991 | 1097 | |||||
1587 | 1778 | |||||
DB_info | Database | KEGG | KEGG_id | 1.14.19.44 | ||
SwissProt | UniProtAcc | G5EG11 | ||||
UniProtIsoformAcc | G5EG11-2 | |||||
UniProt | UniProtAcc | G5EG11 | ||||
UniProt_GCRP | UniProtAcc | G5EG11 | ||||
AlphaFold | entry | G5EG11 | ||||
NCBI_protein | GI_number | GI:293324808 | ||||
Protein_id | CHROMOSOME_IV | CBL43456 | 1 | |||
DB_remark | FAT-4 protein; contains similarity to Pfam domain PF00487 (Fatty acid desaturase); contains similarity to Interpro domains IPR012171 (Fatty acid desaturase), IPR005804 (Fatty acid desaturase domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Isoform | Feature_evidence | WBsf128213 | ||||
Visible | Gene | WBGene00001396 | ||||
Corresponding_transcript | T13F2.1b.1 | |||||
Corresponding_protein | CE44752 | |||||
Corresponding_PCR_product | cenix:38-d2 | |||||
mv_T13F2.1 | ||||||
sjj_T13F2.1 | ||||||
smd_T13F2.1 | ||||||
Corresponding_oligo_set (14) | ||||||
Matching_cDNA (27) | ||||||
RNAi_result | WBRNAi00087288 | |||||
WBRNAi00087318 | ||||||
WBRNAi00001540 | ||||||
WBRNAi00018673 | ||||||
WBRNAi00087287 | ||||||
WBRNAi00035539 | ||||||
WBRNAi00053265 | ||||||
WBRNAi00087289 | ||||||
WBRNAi00087286 | ||||||
WBRNAi00087320 | ||||||
WBRNAi00087319 | ||||||
WBRNAi00102923 | ||||||
WBRNAi00102629 | ||||||
Microarray_results (16) | ||||||
Brief_identification | Delta(5) fatty acid desaturase fat-4 | Accession_evidence | UniProt | SP:G5EG11 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 08 Apr 2014 00:00:00 | WBPerson4025 | ||||
Remark | [100304 gw3] Created this isoform based on the SL1 feature. | Feature_evidence | WBsf128213 | |||
Method | curated |