WormBase Tree Display for CDS: cTel54X.1
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| cTel54X.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | cTel54X | |||
| Structure | Source_exons | 1 | 101 | |||
| 154 | 237 | |||||
| 751 | 1360 | |||||
| 1411 | 1647 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | A4F303 | ||
| UniProt | UniProtAcc | A4F303 | ||||
| UniProt_GCRP | UniProtAcc | A4F303 | ||||
| AlphaFold | entry | A4F303 | ||||
| NCBI_protein | GI_number | GI:351060557 | ||||
| TREEFAM | TREEFAM_ID | TF322006 | ||||
| Protein_id | CHROMOSOME_III | CCD68268 | 1 | |||
| DB_remark | FBXA-6 protein; contains similarity to Pfam domains PF00646 (F-box domain), PF01827 (FTH domain); contains similarity to Interpro domains IPR002900 (Domain of unknown function DUF38/FTH, Caenorhabditis species), IPR001810 (F-box domain), IPR040161 (F-box A protein FB224) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00008352 | ||||
| Corresponding_transcript | cTel54X.1.1 | |||||
| Corresponding_protein | CE20619 | |||||
| Corresponding_PCR_product | cenix:332-h1 | |||||
| mv_cTel54X.1 | ||||||
| sjj_cTel54X.1 | ||||||
| Corresponding_oligo_set (16) | ||||||
| Matching_cDNA (19) | ||||||
| RNAi_result | WBRNAi00068269 | |||||
| WBRNAi00043312 | ||||||
| WBRNAi00012484 | ||||||
| WBRNAi00068270 | ||||||
| WBRNAi00030296 | ||||||
| Microarray_results (17) | ||||||
| Brief_identification | F-box domain-containing protein | Accession_evidence | UniProt | TR:A4F303 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
