WormBase Tree Display for CDS: ZK652.1
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| ZK652.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | ZK652 | |||
| Structure | Source_exons | 1 | 97 | |||
| 148 | 250 | |||||
| 358 | 415 | |||||
| DB_info | Database | SwissProt | UniProtAcc | P34659 | ||
| UniProt | UniProtAcc | P34659 | ||||
| UniProt_GCRP | UniProtAcc | P34659 | ||||
| AlphaFold | entry | P34659 | ||||
| NCBI_protein | GI_number | GI:351020571 | ||||
| TREEFAM | TREEFAM_ID | TF314481 | ||||
| Protein_id | CHROMOSOME_III | CCD62546 | 1 | |||
| DB_remark | SNR-5 protein; contains similarity to Pfam domain PF01423 (LSM domain); contains similarity to Interpro domains IPR001163 (Sm domain, eukaryotic/archaea-type), IPR016487 (Sm-like protein Lsm6/SmF), IPR010920 (LSM domain superfamily) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00004918 | ||||
| Corresponding_transcript | ZK652.1.1 | |||||
| Corresponding_protein | CE00446 | |||||
| Corresponding_PCR_product | TH:330A11 | |||||
| WBPaper00038381:ZK652_1_1 | ||||||
| cenix:330-a11 | ||||||
| mv_ZK652.1 | ||||||
| sjj_ZK652.1 | ||||||
| Corresponding_oligo_set (20) | ||||||
| Matching_cDNA (40) | ||||||
| RNAi_result (23) | ||||||
| Microarray_results (22) | ||||||
| Brief_identification | Probable small nuclear ribonucleoprotein F | Accession_evidence | UniProt | SP:P34659 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf009187 | |||||
| Method | curated |
