WormBase Tree Display for Sequence: ZK1053
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| ZK1053 | DNA | ZK1053 | 22106 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00014199 | 13955 | 17030 | |
| WBGene00014197 | 4471 | 6986 | ||||
| WBGene00014198 | 19153 | 22078 | ||||
| WBGene00014196 | 2001 | 295 | ||||
| WBGene00014200 | 7648 | 8963 | ||||
| WBGene00169224 | 15412 | 15432 | ||||
| WBGene00014201 | 10838 | 13033 | ||||
| WBGene00044786 | 9354 | 10604 | ||||
| CDS_child (99) | ||||||
| Transcript | ZK1053.8 | 15412 | 15432 | |||
| ZK1053.1.1 | 2001 | 295 | ||||
| ZK1053.2.1 | 4471 | 6986 | ||||
| ZK1053.3.1 | 19153 | 22078 | ||||
| ZK1053.4.1 | 13955 | 17030 | ||||
| ZK1053.5.1 | 7648 | 8963 | ||||
| ZK1053.6.1 | 10838 | 13033 | ||||
| Pseudogene | ZK1053.7 | 9354 | 10604 | |||
| PCR_product (26) | ||||||
| Allele (301) | ||||||
| Oligo_set | Aff_ZK1053.1 | 944 | 295 | |||
| Aff_ZK1053.2 | 5755 | 6960 | ||||
| Aff_ZK1053.3 | 21382 | 21981 | ||||
| Aff_ZK1053.4 | 16253 | 16907 | ||||
| Aff_ZK1053.5 | 7862 | 8767 | ||||
| Aff_ZK1053.6 | 12242 | 13026 | ||||
| Feature_object (57) | ||||||
| Feature_data | ZK1053:Polysome | 1 | 22106 | |||
| ZK1053:TranscriptionallyActiveRegion | 1 | 22106 | ||||
| ZK1053:ChIPSeqTF | 1 | 22106 | ||||
| ZK1053:TRF | 1 | 22106 | ||||
| ZK1053:Dust | 1 | 22106 | ||||
| ZK1053:inverted | 1 | 22106 | ||||
| Homol_data (17) | ||||||
| Structure | From | Source | CHROMOSOME_I | |||
| Overlap_right | F44F1 | 21996 | ||||
| Overlap_left | ZK1225 | |||||
| Clone_left_end | ZK1053 | 1 | ||||
| F44F1 | 21996 | |||||
| DB_info | Database | EMBL | NDB_AC | Z82084 | ||
| NDB_SV | Z82084.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Kershaw JK | ||||
| From_laboratory | HX | |||||
| Date_directory | 961107 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | ZK1053 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | eaad71e8f3a88c4ffbfcf1fd28360718 | ||||
| Status | Finished | 07 Nov 1996 00:00:00 | ||||
| Submitted | 06 Nov 1996 00:00:00 | |||||
| Annotated | 05 Mar 1997 00:00:00 | |||||
| Map | Sequence-I | Ends | Left | 6711 | ||
| Right | 6730 | |||||
| Interpolated_map_position | I | 17.313 | ||||
| Assembly_tags | Clone left end | 1 | 4 | ZK1053 | ||
| 21996 | 21999 | F44F1 | ||||
| annotation | 4385 | 4396 | 2 m13 clones show 11 Cs here | |||
| 2834 | 4001 | 15 copies of 39mer tandem repeat. digest with Hind111, EcoR1 shows there are 19-20 copies missing in the assembly. (750-800bp) | ||||
| Finished Right | 22106 | 22098 | ZK1053 | |||
| Finished Left | 1 | 4 | ZK1053 | |||
| Method | Genomic_canonical |
