WormBase Tree Display for CDS: Y67A6A.2a

Y67A6A.2a Evidence: Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: CHROMOSOME_I
  Structure: Source_exons: 1 247
      1389 1515
      3082 3140
      3835 4626
      4681 4886
      4983 5099
  DB_info: Database: SwissProt UniProtAcc O02279
        UniProtIsoformAcc O02279-1
      UniProt UniProtAcc O02279
      UniProt_GCRP UniProtAcc O02279
      AlphaFold entry O02279
      NCBI_protein GI_number GI:14530651
      TREEFAM TREEFAM_ID TF315528
    Protein_id: CHROMOSOME_I CAA21675 2
    DB_remark: NHR-62 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains)); contains similarity to Interpro domains IPR001723 (Nuclear hormone receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding domain), IPR035500 (Nuclear hormone receptor-like domain superfamily)
  Origin: From_laboratory: HX
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Confirmed
    Isoform
  Visible: Gene: WBGene00003652
    Corresponding_transcript: Y67A6A.2a.1
    Corresponding_protein: CE27305
    Corresponding_PCR_product: cenix:18-g11
      mv_Y67A6A.2
      sjj_K10C3.1
      sjj_Y67A6A.2
    Corresponding_oligo_set (17)
    Matching_cDNA (33)
    RNAi_result: WBRNAi00115756
      WBRNAi00037723
      WBRNAi00004776
      WBRNAi00003972
      WBRNAi00070622
      WBRNAi00057976
      WBRNAi00070623
    Microarray_results (21)
    Brief_identification: Nuclear hormone receptor family member nhr-62 Accession_evidence: UniProt SP:O02279
    RNASeq_FPKM (74)
    Last_reviewed: 06 Jun 2008 00:00:00 WBPerson1983
    Remark: [980918 jd] : incorporates K10C3.1
      [010405 dl] Modified prediction based on mRNA AF273813. Added intron in exon 4 Curator_confirmed: WBPerson1846
  Associated_feature: WBsf009197
  Method: curated