WormBase Tree Display for CDS: Y54G2A.11b
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| Y54G2A.11b | SMap | S_parent | Sequence | Y54G2A | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 118 | |||
| 426 | 532 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q86FN8 | ||
| UniProt | UniProtAcc | Q86FN8 | ||||
| AlphaFold | entry | Q86FN8 | ||||
| NCBI_protein | GI_number | GI:351051332 | ||||
| Protein_id | CHROMOSOME_IV | CCD83500 | 1 | |||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | EMBL | C67527 | |||
| Inferred_automatically | transcript_builder | |||||
| Visible | Gene | WBGene00021876 | ||||
| Corresponding_transcript | Y54G2A.11b.1 | |||||
| Y54G2A.11b.2 | ||||||
| Y54G2A.11b.3 | ||||||
| Corresponding_protein | CE33884 | |||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA (17) | ||||||
| Microarray_results | 172971_s_at | |||||
| A_12_P106346 | ||||||
| A_12_P144750 | ||||||
| Aff_Y94H6A_142.K | ||||||
| GPL13394_WBGene00021876 | ||||||
| GPL13914_Y54G2A.11 | ||||||
| GPL14144_Y54G2A.11a_1271-1330_0.947_1_A | ||||||
| GPL19516_CGZ0049156 | ||||||
| GPL19516_CGZ0049157 | ||||||
| GPL21109_Y54G2A.11a | ||||||
| GPL3518_CE27483 | ||||||
| GPL8673_Y54G2A_11bP00138 | ||||||
| GPL8673_Y54G2A_11bP00152 | ||||||
| GPL8673_Y54G2A_11bP00166 | ||||||
| GPL9450_Y54G2A.11 | ||||||
| cea2.c.32012 | ||||||
| Brief_identification | TPR_REGION domain-containing protein | Accession_evidence | UniProt | TR:Q95XX8 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 26 Sep 2014 00:00:00 | WBPerson4025 | ||||
| Remark | [140926 gw3] Took a look at this. It looks like the EST C67527 is a rare transcript of the retained intron. Several introns in this gene appear to be retained. This isoform may be bogus. | Curator_confirmed | WBPerson4025 | |||
| Method | curated |
