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WormBase Tree Display for CDS: Y51H4A.7

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Name Class

Y51H4A.7EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceY51H4A
StructureSource_exons1126
9271198
12451386
14331561
29543246
35183859
39124033
57836076
62186510
DB_infoDatabaseKEGGKEGG_id4.2.1.49
SwissProtUniProtAccQ9NAE2
UniProtUniProtAccQ9NAE2
UniProt_GCRPUniProtAccQ9NAE2
AlphaFoldentryQ9NAE2
NCBI_proteinGI_numberGI:34555983
TREEFAMTREEFAM_IDTF314306
Protein_idCHROMOSOME_IVCAB611392
DB_remarkUROC-1 protein; contains similarity to Pfam domains PF01175 (Urocanase Rossmann-like domain), PF17391 (Urocanase N-terminal domain), PF17392 (Urocanase C-terminal domain); contains similarity to Interpro domains IPR036190 (Urocanase superfamily), IPR038364 (Urocanase, central domain superfamily), IPR035400 (Urocanase, N-terminal domain), IPR035401 (Urocanase, C-terminal domain), IPR035085 (Urocanase, Rossmann-like domain), IPR023637 (Urocanase)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00013103
Corresponding_transcriptY51H4A.7.1
Y51H4A.7.2
Corresponding_proteinCE35671
Corresponding_PCR_productcenix:241-g2
mv_Y51H4A.7
sjj2_Y51H4A.7.1
sjj_Y51H4A.f
Corresponding_oligo_set (17)
Matching_cDNA (109)
RNAi_resultWBRNAi00037369
WBRNAi00062446
WBRNAi00000898
WBRNAi00057194
Microarray_results (19)
Brief_identificationProbable urocanate hydrataseAccession_evidenceUniProtSP:Q9NAE2
RNASeq_FPKM (74)
Last_reviewed17 Jun 2014 00:00:00WBPerson4025
Remark[030829 dl] Truncated prediction at 5' because the EST/OST data indicates exon is UTRCurator_confirmedWBPerson1846
Methodcurated