WormBase Tree Display for CDS: Y48G1BM.6a

Y48G1BM.6a SMap: S_parent: Sequence: Y48G1BM
  Structure: Source_exons: 1 147
      223 414
      2684 2884
      2934 3041
      3094 3201
      3249 3392
  DB_info: Protein_id: CHROMOSOME_I CCD73455 2
  Origin: From_laboratory: RW
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Confirmed
    Isoform: From_analysis: RNASeq_Hillier_elegans
  Visible: Gene: WBGene00021671
    Corresponding_transcript: Y48G1BM.6a.1
    Corresponding_protein: CE54310
    Corresponding_oligo_set: 187373_s_at
      A_12_P176576
      GPL19516_CGZ0047239
      GPL21109_Y48G1BM.6
      GPL8673_Y48G1BM_6P00702
      cea2.3.27268
    Matching_cDNA: FN886859 Inferred_automatically: transcript_builder.pl
      adult_Nanopore_Roach_54562 Inferred_automatically: transcript_builder.pl
      FN886860 Inferred_automatically: transcript_builder.pl
      elegans_PE_SS_GG2159|c6_g1_i1 Inferred_automatically: transcript_builder.pl
      YA_Nanopore_Li_313673 Inferred_automatically: transcript_builder.pl
    RNAi_result: WBRNAi00055472
      WBRNAi00058283
      WBRNAi00019988
    Microarray_results: 187373_s_at
      A_12_P176576
      GPL19516_CGZ0047239
      GPL21109_Y48G1BM.6
      GPL8673_Y48G1BM_6P00702
      cea2.3.27268
    RNASeq_FPKM (74)
    Last_reviewed: 09 Nov 2020 14:16:52 WBPerson51134
    Remark: [201109 skd] Split from retired pseudogene Y48G1BM.6:wp279 and converted to CDS based on RNASeq_splice_high_qual and RNASeq_Hillier_elegans. From_analysis: RNASeq_Hillier_elegans
          RNASeq_splice
      [20090107 tb] merged Y48G1BM.5 into this gene based on the suggestion from Albert Vilella. Curator_confirmed: WBPerson1849
      [20100501 po] removed the three 3' exons based on EST data Curator_confirmed: WBPerson1867
      [180515 pad] This has been converted to a Pseudogene based on the RNASeq data. Curator_confirmed: WBPerson1983
  Method: curated