WormBase Tree Display for CDS: Y37D8A.6
expand all nodes | collapse all nodes | view schema
| Y37D8A.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y37D8A | |||
| Structure | Source_exons | 1 | 129 | |||
| 604 | 699 | |||||
| 772 | 945 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9XWW3 | ||
| UniProt | UniProtAcc | Q9XWW3 | ||||
| UniProt_GCRP | UniProtAcc | Q9XWW3 | ||||
| AlphaFold | entry | Q9XWW3 | ||||
| NCBI_protein | GI_number | GI:3925198 | ||||
| TREEFAM | TREEFAM_ID | TF313294 | ||||
| Protein_id | CHROMOSOME_III | CAA21526 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF10601 (LITAF-like zinc ribbon domain); contains similarity to Interpro domains IPR037519 (LITAF domain containing protein), IPR006629 (LPS-induced tumour necrosis factor alpha factor) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00012548 | ||||
| Corresponding_transcript | Y37D8A.6.1 | |||||
| Y37D8A.6.2 | ||||||
| Y37D8A.6.3 | ||||||
| Corresponding_protein | CE20211 | |||||
| Corresponding_PCR_product | TH:325A3 | |||||
| cenix:325-a3 | ||||||
| mv_Y37D8A.6 | ||||||
| sjj_Y37D8A.6 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA (32) | ||||||
| RNAi_result | WBRNAi00020219 | |||||
| WBRNAi00055888 | ||||||
| WBRNAi00006347 | ||||||
| WBRNAi00036791 | ||||||
| Microarray_results (16) | ||||||
| Brief_identification | LITAF domain-containing protein | Accession_evidence | UniProt | TR:Q9XWW3 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf126465 | |||||
| Method | curated |
