WormBase Tree Display for CDS: Y37D8A.3
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| Y37D8A.3 | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y37D8A | ||
| Structure | Source_exons | 1 | 163 | ||
| 758 | 883 | ||||
| 1247 | 1456 | ||||
| 2250 | 2369 | ||||
| 3388 | 3492 | ||||
| 4938 | 5040 | ||||
| 7668 | 7761 | ||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9XWV1 | |
| UniProt | UniProtAcc | Q9XWV1 | |||
| UniProt_GCRP | UniProtAcc | Q9XWV1 | |||
| AlphaFold | entry | Q9XWV1 | |||
| NCBI_protein | GI_number | GI:3925212 | |||
| TREEFAM | TREEFAM_ID | TF353007 | |||
| Protein_id | CHROMOSOME_III | CAA21540 | 1 | ||
| DB_remark | contains similarity to Interpro domain IPR040282 (Abnormal cell migration protein 18-like) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Visible | Gene | WBGene00012545 | |||
| Corresponding_transcript | Y37D8A.3.1 | ||||
| Corresponding_protein | CE20208 | ||||
| Corresponding_PCR_product | TH:338H5 | ||||
| TH:339B3 | |||||
| cenix:338-h5 | |||||
| cenix:339-b3 | |||||
| mv_Y37D8A.3 | |||||
| sjj_Y37D8A.3 | |||||
| Corresponding_oligo_set (18) | |||||
| Matching_cDNA | male_Nanopore_Roach_124092 | Inferred_automatically | transcript_builder.pl | ||
| young_adult_Nanopore_Roach_31588 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_79593 | Inferred_automatically | transcript_builder.pl | |||
| L4_Nanopore_Roach_17993 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Roach_45138 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Roach_27219 | Inferred_automatically | transcript_builder.pl | |||
| L3_Nanopore_Roach_26957 | Inferred_automatically | transcript_builder.pl | |||
| L4_Nanopore_Roach_52973 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Roach_6054 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Roach_81461 | Inferred_automatically | transcript_builder.pl | |||
| adult_Nanopore_Roach_26723 | Inferred_automatically | transcript_builder.pl | |||
| L2_Nanopore_Roach_6332 | Inferred_automatically | transcript_builder.pl | |||
| L2_Nanopore_Roach_28086 | Inferred_automatically | transcript_builder.pl | |||
| L2_Nanopore_Roach_83842 | |||||
| L4_Nanopore_Roach_17884 | Inferred_automatically | transcript_builder.pl | |||
| L3_Nanopore_Roach_5863 | Inferred_automatically | transcript_builder.pl | |||
| L3_Nanopore_Roach_76561 | Inferred_automatically | transcript_builder.pl | |||
| male_Nanopore_Roach_31279 | Inferred_automatically | transcript_builder.pl | |||
| elegans_PE_SS_GG7040|c0_g1_i2 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_87856 | Inferred_automatically | transcript_builder.pl | |||
| OSTF170A5_1 | Inferred_automatically | transcript_builder.pl | |||
| yk1679d12.5 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_278607 | Inferred_automatically | transcript_builder.pl | |||
| yk1436g12.3 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_62176 | Inferred_automatically | transcript_builder.pl | |||
| yk1532f01.3 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_301910 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_60493 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_193153 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_114939 | Inferred_automatically | transcript_builder.pl | |||
| elegans_PE_SS_GG7040|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_34828 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_33864 | Inferred_automatically | transcript_builder.pl | |||
| OSTR170A5_1 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_2468 | Inferred_automatically | transcript_builder.pl | |||
| yk1436g12.5 | Inferred_automatically | transcript_builder.pl | |||
| yk1532f01.5 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | WBRNAi00007144 | ||||
| WBRNAi00036789 | |||||
| WBRNAi00055885 | |||||
| WBRNAi00055884 | |||||
| WBRNAi00007146 | |||||
| Microarray_results (19) | |||||
| RNASeq_FPKM (74) | |||||
| Associated_feature | WBsf014920 | ||||
| Method | curated |
