WormBase Tree Display for Variation: WBVar02151953

WBVar02151953 Name: Public_name: tm11628
    Other_name: K01C8.1.2:c.1042-24_1128del
      K01C8.1.1:c.1042-24_1128del
    HGVSg: CHROMOSOME_II:g.8266771_8266881del
  Sequence_details: SMap: S_parent: Sequence: K01C8
    Flanking_sequences: ataaggtttgatagttgataactgggtcat gttggattagcagctattttggaaggaaaa
    Mapping_target: K01C8
    Source_location: 7 CHROMOSOME_II 8266770 8266882 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm11628_external
      tm11628_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 11628
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00010456
    Transcript: K01C8.1.2 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K01C8.1.2:c.1042-24_1128del
        cDNA_position: ?-1382
        CDS_position: ?-1128
        Protein_position: ?-376
        Intron_number: 8/9
        Exon_number: 9/10
      K01C8.1.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K01C8.1.1:c.1042-24_1128del
        cDNA_position: ?-1141
        CDS_position: ?-1128
        Protein_position: ?-376
        Intron_number: 7/8
        Exon_number: 8/9
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Remark: 5610/5611-5721/5722 (111 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele