WormBase Tree Display for Gene: WBGene00010456
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| WBGene00010456 | SMap | S_parent | Sequence | K01C8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srdh-1 | Person_evidence | WBPerson9055 | |||||
| WBPerson55847 | |||||||||
| Sequence_name | K01C8.1 | ||||||||
| Molecular_name | K01C8.1 | ||||||||
| K01C8.1.1 | |||||||||
| CE36943 | |||||||||
| K01C8.1.2 | |||||||||
| Other_name | CELE_K01C8.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | srdh-1 | ||||||||
| DB_info | Database | AceView | gene | 2I557 | |||||
| WormQTL | gene | WBGene00010456 | |||||||
| WormFlux | gene | WBGene00010456 | |||||||
| NDB | locus_tag | CELE_K01C8.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010456|UniProtKB=Q21080 | |||||||
| family | PTHR48078 | ||||||||
| NCBI | gene | 174326 | |||||||
| RefSeq | protein | NM_063340.5 | |||||||
| TREEFAM | TREEFAM_ID | TF314863 | |||||||
| TrEMBL | UniProtAcc | Q21080 | |||||||
| UniProt_GCRP | UniProtAcc | Q21080 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 27 Oct 2021 12:29:35 | WBPerson1983 | Name_change | CGC_name | srdh-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srdh | ||||||||
| Allele (34) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00070245 | ||||||||
| 00070246 | |||||||||
| 00070247 | |||||||||
| 00070248 | |||||||||
| 00070249 | |||||||||
| 00070250 | |||||||||
| 00117863 | |||||||||
| 00117864 | |||||||||
| Ortholog (32) | |||||||||
| Paralog (12) | |||||||||
| Structured_description | Automated_description | Predicted to enable L-serine ammonia-lyase activity and L-threonine ammonia-lyase activity. Predicted to be involved in L-serine catabolic process; isoleucine biosynthetic process; and threonine catabolic process. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K01C8.1 | |||||||
| Corresponding_CDS_history | K01C8.1:wp127 | ||||||||
| Corresponding_transcript | K01C8.1.1 | ||||||||
| K01C8.1.2 | |||||||||
| Other_sequence (81) | |||||||||
| Associated_feature | WBsf657954 | ||||||||
| WBsf657955 | |||||||||
| WBsf988687 | |||||||||
| WBsf1012663 | |||||||||
| WBsf221724 | |||||||||
| WBsf221725 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033544 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00075854 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016385 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049602 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033812 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028087 | ||||||||
| Expr1034561 | |||||||||
| Expr1153333 | |||||||||
| Expr2004642 | |||||||||
| Expr2022870 | |||||||||
| Drives_construct | WBCnstr00031406 | ||||||||
| Construct_product | WBCnstr00031406 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (217) | |||||||||
| Interaction (119) | |||||||||
| Map_info | Map | II | Position | 0.755243 | |||||
| Positive | Positive_clone | K01C8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
